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Related Experiment Video

Updated: Jun 6, 2026

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics

Published on: June 17, 2012

Paintomics: a web based tool for the joint visualization of transcriptomics and metabolomics data.

Fernando García-Alcalde¹, Federico García-López, Joaquín Dopazo

¹Bioinformatics and Genomics Department, Centro de Investigaciones Príncipe Felipe, Valencia, Spain.

Bioinformatics (Oxford, England)

|November 25, 2010

Summary

Paintomics integrates transcriptomics and metabolomics data for systems biology research. This bioinformatics tool visualizes complex omics data on biological pathways, aiding interpretation.

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Last Updated: Jun 6, 2026

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics

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Published on: June 17, 2012

A Fast and Quantitative Method for Post-translational Modification and Variant Enabled Mapping of Peptides to Genomes

A Fast and Quantitative Method for Post-translational Modification and Variant Enabled Mapping of Peptides to Genomes

Published on: May 22, 2018

Area of Science:

Systems biology
Bioinformatics
Genomics
Metabolomics

Background:

Omics technologies like transcriptomics and metabolomics enable systems biology studies.
Analyzing complex, multi-level biochemical data requires integrated approaches.
Visualizing disparate biomolecular data on biological pathways is crucial for interpretation.

Purpose of the Study:

To develop an easy-to-use bioinformatics resource for integrated omics data analysis.
To facilitate the visual analysis of transcriptomics and metabolomics data.
To enable the mapping of significant gene and metabolite changes onto biological pathways.

Main Methods:

Development of the Paintomics web server.
Integration of transcriptomics and metabolomics datasets.
Visualization of omics data onto KEGG pathway maps.

Main Results:

The Paintomics web server provides a user-friendly platform for integrated omics analysis.
It effectively visualizes transcriptomics and metabolomics data on KEGG pathways.
The tool facilitates the analysis of significant gene and metabolite changes across different conditions.

Conclusions:

Paintomics is a valuable resource for systems biology research.
Integrated visualization of omics data enhances biological interpretation.
The web server is freely available for researchers worldwide.