Related Experiment Video
Updated: Jun 6, 2026

Site-specific Bacterial Chromosome Engineering: ΦC31 Integrase Mediated Cassette Exchange (IMCE)
Published on: March 16, 2012
I-SceI-mediated plasmid deletion and intra-molecular recombination in Spiroplasma citri
Marc Breton1, Sybille Duret, Laure Béven
1INRA, Génomique Diversité et Pouvoir Pathogéne, Villenave d'Ornon, France.
Abstract:
S. citri wild-type strain GII3 carries six plasmids (pSci1 to -6) that are thought to encode determinants involved in the transmission of the spiroplasma by its leafhopper vector. In this study we report the use of meganuclease I-SceI for plasmid deletion in S. citri. Plasmids pSci1NT-I and pSci6PT-I, pSci1 and pSci6 derivatives that contain the tetM selection marker and a unique I-SceI recognition site were first introduced into S. citri strains 44 (having no plasmid) and GII3 (carrying pSci1-6), respectively. Due to incompatibility of homologous replication regions, propagation of the S. citri GII3 transformant in selective medium resulted in the replacement of the natural pSci6 by pSci6PT-I. The spiroplasmal transformants were further transformed by an oriC plasmid carrying the I-SceI gene under the control of the spiralin gene promoter. In the S. citri 44 transformant, expression of I-SceI resulted in rapid loss of pSciNT-I showing that expression of I-SceI can be used as a counter-selection tool in spiroplasmas. In the case of the S. citri GII3 transformant carrying pSci6PT-I, expression of I-SceI resulted in the deletion of plasmid fragments comprising the I-SceI site and the tetM marker. Delineating the I-SceI generated deletions proved they had occurred though recombination between homologous sequences. To our knowledge this is the first report of I-SceI mediated intra-molecular recombination in mollicutes.
Insights
Researchers utilized meganuclease I-SceI for plasmid deletion in Spiroplasma citri. This method enabled targeted removal of plasmids, offering a new tool for genetic manipulation in spiroplasmas.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Spiroplasma citri (S. citri) harbors six plasmids (pSci1-6) potentially involved in transmission by leafhopper vectors.
- Understanding and manipulating these plasmids is crucial for studying S. citri biology and vector interactions.
Purpose of the Study:
- To investigate the use of meganuclease I-SceI for targeted plasmid deletion in S. citri.
- To establish I-SceI as a counter-selection tool for genetic engineering in mollicutes.
Main Methods:
- Introduction of engineered plasmids (pSci1NT-I, pSci6PT-I) containing I-SceI recognition sites and a tetM marker into S. citri strains.
- Transformation with an oriC plasmid expressing the I-SceI gene under the spiralin promoter.
- Analysis of plasmid loss and deletion events mediated by I-SceI expression.
Main Results:
- I-SceI expression led to the rapid loss of a target plasmid (pSciNT-I) in S. citri strain 44, demonstrating its utility as a counter-selection marker.
- In S. citri strain GII3, I-SceI expression induced deletion of plasmid fragments containing the I-SceI site and tetM marker.
- Deletions were confirmed to occur via intramolecular recombination between homologous sequences.
Conclusions:
- Meganuclease I-SceI can be effectively used for plasmid deletion in S. citri.
- This study reports the first instance of I-SceI-mediated intramolecular recombination in mollicutes.
- The findings provide a novel method for genetic manipulation of S. citri plasmids.
More Related Videos
Related Concept Videos
Conservative Site-specific Recombination and Phase Variation
The recognition sites for Cre recombinase called LoxP...
Bacterial Phylum Tenericutes

