Related Experiment Video
Updated: Jun 6, 2026

Synthesis, Characterization, and Application of Superparamagnetic Iron Oxide Nanoprobes for Extrapulmonary Tuberculosis Detection
Published on: February 16, 2020
Methylene blue is a good background stain for tuberculosis light-emitting diode fluorescence microscopy
A Van Deun1, K J M Aung, A Hamid Salim
1International Union Against Tuberculosis and Lung Disease, Paris, France. avandeun@theunion.org
Setting:
Damien Foundation Bangladesh tuberculosis (TB) control projects.
Objectives:
To compare blue ink, potassium permanganate and methylene blue background staining for transmitted light-emitting diode (LED) TB fluorescence microscopy (FM).
Design:
Auramine smears made in triplicate from Ziehl-Neelsen (ZN) acid-fast bacilli (AFB) positive or negative sputum and stained with one of the background variations were read blind by LED FM. Reference laboratory rechecking of discordant series was used before and after auramine restaining as the gold standard.
Results:
Of 1977 series evaluated, 991 (50.1%) were made from ZN-positive specimens. There were 919, 942 and 958 FM true-positives with blue ink, permanganate and methylene blue counterstaining, against respectively 12, 12 and 16 false-positives. Methylene blue counterstaining was more sensitive (95.6%, 95%CI 94.2-96.8) than blue ink or permanganate (92.7%, 95%CI 90.9-94.3 and 93.6%, 95%CI 91.9-95.0; respectively P < 0.01 and < 0.05). No AFB could be found in 85% and 18% of 180 discordant series without and with restaining.
Conclusions:
Methylene blue is at least equivalent to potassium permanganate counterstaining for FM using blue LED transmitted excitation and is cheaper than blue ink. Restaining of all smears prior to first re-reading may be unavoidable for blinded rechecking of auramine-stained smears for external quality assessment.
Related Concept Videos
Simple Staining Technique
Fixation and Sectioning
The simplest type of preparation is the wet mount, in which the specimen is placed in a drop of liquid on the slide. A liquid specimen can be directly deposited on the slide using a dropper. Solid specimens, such as skin scraping, can be placed on the slide before adding a drop of liquid to prepare the wet mount. Sometimes the liquid is simply water, but stains are often added...
Differential Staining Technique
Special Staining Techniques
Two-Dimensional Microscopy in Microbiology
Immunofluorescence Microscopy
The...

