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Updated: Jun 6, 2026

Peptide Scanning-assisted Identification of a Monoclonal Antibody-recognized Linear B-cell Epitope
Published on: March 24, 2017
Antigen processing by nardilysin and thimet oligopeptidase generates cytotoxic T cell epitopes
Jan H Kessler1, Selina Khan, Ulrike Seifert
1Department of Immunohematology and Blood Transfusion, Leiden University Medical Center, Leiden, The Netherlands. j.h.kessler@amc.uva.nl
Cytotoxic T lymphocyte (CTL) epitope generation involves nardilysin and thimet oligopeptidase (TOP) alongside the proteasome. These enzymes broaden the peptide repertoire, enhancing immune defense against cancer and pathogens.
Area of Science:
- Immunology
- Molecular Biology
- Proteasome Biology
Background:
- Cytotoxic T lymphocytes (CTLs) are crucial for adaptive immunity, recognizing peptide antigens presented by HLA class I molecules.
- The proteasome is traditionally considered the primary enzyme responsible for generating the C-terminal ends of CTL epitopes.
- Understanding the full enzymatic machinery for antigen processing is vital for cancer immunotherapy and infectious disease research.
Purpose of the Study:
- To investigate the role of cytosolic endopeptidases, specifically nardilysin and thimet oligopeptidase (TOP), in the generation of CTL epitopes.
- To determine how nardilysin and TOP complement proteasome activity in antigen processing.
- To elucidate the contribution of these enzymes to the repertoire of antigenic peptides presented to CTLs.
Main Methods:
- Proteasome activity assays.
- Analysis of CTL epitope generation using nardilysin and TOP.
- Mass spectrometry-based peptidome profiling.
- Functional validation of epitopes derived from tumor antigens (PRAME, MART-1) and viral proteins (EBNA3C).
Main Results:
- Nardilysin and TOP were found to complement proteasome activity in CTL epitope generation.
- Both enzymes, individually or together, were essential for producing specific CTL epitopes from PRAME, EBNA3C, and MART-1.
- Thimet oligopeptidase (TOP) acted as a C-terminal trimming peptidase, while nardilysin contributed to both C-terminal and N-terminal processing.
- The combined action of these enzymes significantly broadens the repertoire of antigenic peptides.
Conclusions:
- Nardilysin and TOP play significant roles in antigen processing and CTL epitope generation, expanding beyond the known function of the proteasome.
- These enzymes are critical for generating a diverse range of antigenic peptides, thereby enhancing immune surveillance.
- Targeting nardilysin and TOP could represent a novel strategy to bolster immune responses against cancer and intracellular pathogens.
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