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Updated: Jun 5, 2026

Real-Time Polymerase Chain Reaction-Based Detection and Quantification of Hepatitis B Virus DNA
Published on: December 15, 2023
Molecular epidemiology of chronic hepatitis B virus infection in Greece
Asimina Fylaktou1, Fylaktou Asimina, Dimitrios Papaventsis
1Virology Laboratory, Papageorgiou Regional General Hospital, Thessaloniki, Greece.
Insights
Hepatitis B virus (HBV) genotype D is predominant in Greece, with common mutations like G145R. These mutations did not affect detection by commercial immunoassays, offering insights into chronic HBV infection management.
Area of Science:
- Hepatology
- Virology
- Molecular Biology
Background:
- Limited virological data exists for chronic Hepatitis B virus (HBV) infection in Greece.
- Understanding HBV genotypes, subtypes, and mutations is crucial for patient management and public health.
Purpose of the Study:
- To investigate HBV genotypes, HBsAg subtypes, and HBsAg "a" determinant mutations in chronically infected patients in Greece.
- To analyze the prevalence of different HBV genotypes and subtypes and identify common mutations.
Main Methods:
- Serum samples from 135 HBsAg-positive patients were analyzed for serologic, virologic, and biochemical markers.
- HBV genotypes and HBsAg subtypes were determined using partial S gene sequencing, phylogenetic analysis, and bioinformatics tools.
- Mutations in the HBsAg "a" determinant were identified and analyzed.
Main Results:
- HBV genotype D was predominant (98%), primarily D/ayw2 (73%) and D/ayw3 (27%).
- Genotypes B and C were found only in Chinese immigrants (1%).
- Point mutations were detected in 26% of cases, including the G145R "vaccine escape" mutation, but did not impede commercial immunoassay detection.
Conclusions:
- HBV genotype D and its subtypes are dominant in the Greek chronic HBV-infected population.
- The identified mutations, including G145R, did not interfere with the detection of HBsAg by commercial assays.
- This study provides valuable virological data for Greece, aiding in the understanding and management of chronic HBV infection.
Abstract:
Virological data on chronic hepatitis B virus (HBV) infection in Greece are limited. HBV genotypes, surface antigen (HBsAg) subtypes, and HBsAg "a" determinant mutations among patients infected chronically with HBV, were investigated. Serum samples from 135 HBsAg positive patients were tested. Serologic (HBsAg, anti-HBs, HBeAg, and anti-HBe), virologic (HBV-DNA quantitation) and biochemical markers (serum alanine aminotransferase/ALT and aspartate aminotransferase/AST) were analyzed. HBV genotypes and HBsAg subtypes were determined by partial sequencing of the S gene. Genotyping was performed by using the National Center for Biotechnology Information online Genotyping tool and phylogenetic analysis. Nucleotide sequences were aligned pair wise with ClustalW and phylogenetic trees were constructed by the neighbor-joining method. Sequences were also used to predict HBV HBsAg subtypes. In six patients (4%), simultaneous presence of HBsAg and anti-HBs was determined, whereas 47 patients (35%) were HBeAg positive, 84 (62.5%) were anti-HBe positive, and four patients (3%) were characterized by the simultaneous presence of HBeAg and anti-HBe. Mean ALT was 238 IU/L (standard deviation = 576.84), and HBV-DNA levels ranged from 1.02 × 10(5) to 2.2 × 10(7) IU/ml. Genotype D was predominant (98%), with viral groups D/ayw2 (73%) and D/ayw3 (27%). Group A/adw accounted for 1% of cases. Genotypes B and C were found exclusively in the Chinese immigrants (1%). Single or multiple point mutations were found in 35 cases (26%). Some of the most common mutations occurred at amino acid positions 129, 133, 134, 144, 145, including the "vaccine escape" mutation G145R. Mutations analysis revealed that amino acid substitutions did not affect detection by commercial immunoassays.
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