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Updated: Jun 5, 2026

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Single-Particle Cryo-EM Data Collection with Stage Tilt using Leginon
Published on: July 1, 2022
Precise beam-tilt alignment and collimation are required to minimize the phase error associated with coma in
Robert M Glaeser1, Dieter Typke, Peter C Tiemeijer
1Life Sciences Division, Lawrence Berkeley National Laboratory, University of California, Berkeley, CA 94720, USA. rmglaeser@lbl.gov
Journal of Structural Biology
|December 25, 2010
Summary
Achieving high-resolution electron microscopy (0.4nm or better) requires precise illumination control to prevent phase errors from axial and off-axis coma. Standard contrast transfer function correction methods do not address these coma-induced errors.
Area of Science:
- Physical Sciences
- Materials Science
- Microscopy
Background:
- High-resolution electron microscopy demands meticulous illumination alignment.
- Standard alignment methods may be insufficient for resolutions of 0.4nm or better.
- Axial and off-axis coma can introduce significant phase errors at higher resolutions.
Purpose of the Study:
- To highlight the impact of coma on high-resolution electron microscopy data quality.
- To explain the origins of axial and off-axis coma in electron microscopy.
- To provide guidance on experimental conditions to mitigate coma-induced phase errors.
Main Methods:
- Analysis of phase errors in electron microscopy.
- Explanation of coma in terms of electron diffraction pattern shifts.
- Review of experimental conditions affecting coma.
Main Results:
- Axial and off-axis coma introduce phase errors not corrected by standard CTF methods.
- Coma originates from misalignment of the illumination relative to the optical axis.
- Specific experimental conditions can exacerbate or mitigate coma effects.
Conclusions:
- Careful illumination adjustment is critical for high-resolution electron microscopy.
- Understanding coma formation is essential for accurate data interpretation.
- Implementing specific setup procedures can prevent coma from degrading image quality.

