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Methyl 2-(1,3-dioxoisoindolin-2-yl)acrylate.

Ya-Wen Wang1, Yu Peng

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Acta Crystallographica. Section E, Structure Reports Online
|January 5, 2011
PubMed
Summary

This study examines a dehydro-amino acid compound, revealing its unique molecular structure. The research highlights the non-parallel orientation of the acrylate double bond and carbonyl group, indicating an s-trans configuration.

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Area of Science:

  • Biochemistry
  • Organic Chemistry
  • Crystallography

Background:

  • Dehydro-amino acids are crucial building blocks in peptide synthesis and protein structure.
  • Understanding the stereochemistry of these molecules is vital for predicting their chemical behavior and biological function.
  • The title compound, C(12)H(9)NO(4), represents an important class of dehydro-amino acids.

Purpose of the Study:

  • To elucidate the three-dimensional structure of the title dehydro-amino acid compound.
  • To investigate the spatial relationship between the acrylate double bond and the adjacent carbonyl group.
  • To determine the specific configuration (s-cis or s-trans) around the relevant functional groups.

Main Methods:

  • Single-crystal X-ray diffraction was employed to determine the molecular structure.
  • Crystallographic data were analyzed to ascertain bond lengths, bond angles, and torsional angles.
  • The conformation of the acrylate and carbonyl moieties was precisely characterized.

Main Results:

  • The crystal structure of C(12)H(9)NO(4) was successfully determined.
  • Analysis revealed that the acrylate C=C double bond is not parallel to the adjacent carbonyl group.
  • An s-trans configuration was definitively observed for this arrangement.

Conclusions:

  • The observed s-trans configuration in this dehydro-amino acid has implications for its reactivity and potential biological activity.
  • The non-parallel orientation provides insights into the conformational preferences of dehydro-amino acids.
  • This structural information is valuable for synthetic chemists and structural biologists working with similar compounds.