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Updated: Jun 5, 2026

Ubiquitin Chain Analysis by Parallel Reaction Monitoring
Published on: June 17, 2020
Controlled enzymatic synthesis of natural-linkage, defined-length polyubiquitin chains using lysines with removable
Carlos A Castañeda1, Jia Liu, Tanuja R Kashyap
1Center for Biomolecular Structure and Organization, University of Maryland, College Park, Maryland 20742, USA.
Abstract:
E2 enzymes catalyze the ATP-dependent polymerization of polyubiquitin chains which function as molecular signals in the regulation of numerous cellular processes. Here we present a method that uses genetically encoded unnatural amino acids to halt and re-start ubiquitin polymerization providing access to natural-linkage, precision-length ubiquitin chains that can be used for biochemical, structural, and dynamics studies.
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