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T and B Cell Receptor Immune Repertoire Analysis using Next-generation Sequencing
Published on: January 12, 2021
Somatic diversity in CDR3 loops allows single V-genes to encode innate immunological memories for multiple pathogens
Christy A Thomson1, Ken Q Little, Donald C Reason
1The Biomedical Research Centre, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada.
Journal of Immunology (Baltimore, Md. : 1950)
|January 14, 2011
Summary
The IGVK3-11 and IGVH3-30 immunoglobulin V-genes can generate protective antibodies against Streptococcus pneumoniae and human CMV. These germline V-genes may encode innate immunological memory.
Area of Science:
- Immunology
- Molecular Biology
- Microbiology
Background:
- Human antibody (Ab) responses to pathogens often involve limited immunoglobulin (Ig) V-genes.
- The IGVK3-11 and IGVH3-30 V-genes are frequently found in protective antibodies against Streptococcus pneumoniae (23F polysaccharide) and human cytomegalovirus (CMV) gB protein.
Purpose of the Study:
- To investigate the role of germline IGVK3-11 and IGVH3-30 V-genes in antibody binding and function.
- To determine if these germline V-genes can encode protective antibodies against distinct antigens.
Main Methods:
- Constructed IgGs using germline IGVK3-11 and IGVH3-30 V-genes with specific CDR3 sequences from a hypermutated anti-23F antibody.
- Assessed antibody binding specificity to 23F pneumococcal polysaccharides and L-rhamnose.
- Evaluated complement-dependent phagocytosis of S. pneumoniae by human neutrophils.
Main Results:
- Germline V-gene encoded IgGs specifically bound 23F polysaccharides and L-rhamnose, with no cross-reactivity to other glycans or pneumococcal serotypes.
- These antibodies mediated complement-dependent phagocytosis of encapsulated 23F S. pneumoniae.
- Mutations in CDRL3 and CDRH3 significantly impacted antibody binding.
Conclusions:
- The IGKV3-11 and IGHV3-30 V-genes, when recombined with specific CDR3 sequences, can encode binding sites for protective antibodies against diverse antigens.
- These V-genes may contribute to innate immunological memory against S. pneumoniae and human CMV.
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