Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Video

Updated: Jun 4, 2026

Fluorescence Imaging with One-nanometer Accuracy (FIONA)
11:56

Fluorescence Imaging with One-nanometer Accuracy (FIONA)

Published on: September 26, 2014

Data Analysis Methods for Fluorescence Imaging with One-Nanometer Accuracy (FIONA).

Paul R Selvin1, Tyler Lougheed, Melinda Tonks Hoffman

  • 1Biophysics Center and Physics Department, University of Illinois, Urbana, IL, 61801, USA.

CSH Protocols
|March 2, 2011
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Accessibility of telomeric overhangs to stabilizing small-molecule ligands.

Nucleic acids research·2026
Same author

Counting-based inference of mutant growth rates from pooled sequencing across growth regimes.

bioRxiv : the preprint server for biology·2026
Same author

"Recurrent Extinction of Resistance Mutations Leads to Convergent Multidrug Resistance in Sequential Antibiotic Treatment".

bioRxiv : the preprint server for biology·2026
Same author

Saturation mutagenesis map of generalist versus specialist adaptations of β-lactamase to novel antibiotics.

bioRxiv : the preprint server for biology·2026
Same author

Exposure to Nanoplastics Disrupts Neurotransmitter Release in Rat Hippocampal Neurons.

Environment & health (Washington, D.C.)·2026
Same author

Direct Observation of Nanometer-Sized Steps of Single Myosin VI Molecules in Living Cells.

Nano letters·2026
Same journal

Identification of positive GATEWAY expression clones when both the pENTRY and pDEST vectors contain the same marker for bacterial selection.

CSH protocols·2012
Same journal

Imaging protein interactions by FRET microscopy: cell preparation for FRET analysis.

CSH protocols·2012
Same journal

Imaging protein interactions by FRET microscopy: labeling proteins with fluorescent dyes.

CSH protocols·2012
Same journal

Bradford assay.

CSH protocols·2012
Same journal

Detection of ubiquitylated proteins in mammalian cells.

CSH protocols·2012
Same journal

Imaging of organelle membrane systems and membrane traffic in living cells.

CSH protocols·2012
See all related articles

Fluorescence Imaging with One-nanometer Accuracy (FIONA) enables precise localization of single fluorophores. This article details software options for analyzing FIONA experimental data.

Area of Science:

  • Biophysics
  • Optical Microscopy
  • Nanotechnology

Background:

  • Single-molecule localization microscopy is crucial for understanding biological processes at the nanoscale.
  • Accurate localization of fluorophores is essential for high-resolution imaging.
  • Existing methods may have limitations in accuracy or complexity.

Purpose of the Study:

  • To provide an overview of data analysis options for Fluorescence Imaging with One-nanometer Accuracy (FIONA) experiments.
  • To guide researchers in selecting appropriate software for FIONA data processing.
  • To facilitate the accurate interpretation of nanometer-scale localization data.

Main Methods:

  • Description of various software tools and workflows for FIONA data analysis.
  • Explanation of data acquisition and export requirements for analysis.

More Related Videos

Automated Two-dimensional Spatiotemporal Analysis of Mobile Single-molecule FRET Probes
08:26

Automated Two-dimensional Spatiotemporal Analysis of Mobile Single-molecule FRET Probes

Published on: November 23, 2021

A Femtoliter Droplet Array for Massively Parallel Protein Synthesis from Single DNA Molecules
10:45

A Femtoliter Droplet Array for Massively Parallel Protein Synthesis from Single DNA Molecules

Published on: June 20, 2020

Related Experiment Videos

Last Updated: Jun 4, 2026

Fluorescence Imaging with One-nanometer Accuracy (FIONA)
11:56

Fluorescence Imaging with One-nanometer Accuracy (FIONA)

Published on: September 26, 2014

Automated Two-dimensional Spatiotemporal Analysis of Mobile Single-molecule FRET Probes
08:26

Automated Two-dimensional Spatiotemporal Analysis of Mobile Single-molecule FRET Probes

Published on: November 23, 2021

A Femtoliter Droplet Array for Massively Parallel Protein Synthesis from Single DNA Molecules
10:45

A Femtoliter Droplet Array for Massively Parallel Protein Synthesis from Single DNA Molecules

Published on: June 20, 2020

  • Discussion of different analytical approaches for fluorophore localization.
  • Main Results:

    • Identification of multiple software solutions suitable for FIONA data analysis.
    • Outlining of the steps involved in processing FIONA data from acquisition to analysis.
    • Highlighting the importance of proper data formatting for accurate results.

    Conclusions:

    • Effective data analysis is critical for achieving nanometer accuracy with FIONA.
    • A range of software options are available to support FIONA experiments.
    • Researchers can select the best analysis tools based on their specific experimental needs and technical expertise.