Related Experiment Video
Updated: Jun 3, 2026

Immunoprecipitation with an Anti-Epitope Tag Affinity Gel to Study Protein-Protein Interactions
Published on: January 5, 2024
Production of antibodies using proteins in gel bands
Abstract:
A number of methods for preparing proteins as antigens have been described (1). These include solubilization of protein samples in buffered solutions (2), solubilization of nitrocellulose filters to which proteins have been adsorbed (3), and emulsification of protein bands in polyacrylamide gels for direct injections (4-8). The latter technique can be used to immunize mice or rabbits for production of antisera or to immunize mice for production of monoclonal antibodies (9-11). This approach is particularly advantageous when protein purification by other means is not practical, as in the case of proteins insoluble without detergent. A further advantage of this method is an enhancement of the immune response, since polyacrylamide helps to retain the antigen in the animal and so acts as an adjuvant (7). The use of the protein directly in the gel band (without elution) is also helpful when only small amounts of protein are available. For instance, in this laboratory, we routinely immunize mice with 5-10 µg total protein using this method; we have not determined the lower limit of total protein that can be used to immunize rabbits.
Related Concept Videos
Western Blotting
The technique begins with separating proteins from the sample using sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), followed by protein transfer, immunoblotting, and finally, protein detection.
Two-dimensional Gel Electrophoresis
The first dimension separation uses the isoelectric focusing or IEF technique performed on immobilized pH gradient (IPG) strips that separate proteins according to their isoelectric points.
Biological samples, such as cells...
Immunoprecipitation
Chromatin Immunoprecipitation
Chromatin immunoprecipitation, also known as ChIP, is used to study protein-DNA or...
Hybridoma Technology
Hybridoma Selection
Commonly used fusion techniques — electroporation, polyethylene glycol...
SDS-PAGE
A variation of gel electrophoresis, termed polyacrylamide gel electrophoresis (PAGE), is commonly used for separating proteins according to their molecular size by passing them through a polyacrylamide gel. Because of the varying charges associated with amino acid side chains, PAGE can be used to separate intact proteins...

