Related Experiment Video
Updated: Jun 3, 2026

09:38
Adapting 3' Rapid Amplification of CDNA Ends to Map Transcripts in Cancer
Published on: March 28, 2018
PCR-Based Full-Length cDNA Cloning Utilizing the Universal-Adaptor/Specific DOS Primer-Pair Strategy
1Department of Pathology, University of Pittsburgh School of Medicine, Pittsburgh, PA.
Methods in Molecular Biology (Clifton, N.J.)
|March 15, 2011
Summary
This study introduces a novel molecular cloning protocol that uses N-terminal protein sequences to selectively amplify and clone full-length complementary DNAs (cDNAs). This method bypasses the need for extensive library screening, accelerating the identification of low-abundance molecules.
Area of Science:
- Molecular Biology
- Biochemistry
- Genomics
Background:
- Biological systems involve low-abundance molecules that are difficult to isolate.
- DNA sequencing is crucial for biological molecule characterization.
- Screening large recombinant libraries for rare clones is a significant bottleneck.
Purpose of the Study:
- To develop a streamlined protocol for cloning full-length cDNAs.
- To circumvent the laborious process of screening recombinant libraries.
- To enable efficient identification of low-abundance biological molecules.
Main Methods:
- Utilizing N-terminal protein sequence information.
- Applying advances in protein microsequencing.
- Integrating polymerase chain reaction (PCR) for selective amplification.
- Developing a protocol for selective cDNA amplification and cloning.
Main Results:
- Successful development of a protocol for selective amplification and cloning of specific full-length cDNAs.
- Demonstrated circumvention of traditional library screening for certain applications.
- Enabled direct access to sequence determination for low-abundance molecules.
Conclusions:
- The developed protocol offers an efficient alternative to library screening for cDNA cloning.
- Protein sequence data can be effectively leveraged for molecular cloning strategies.
- This approach accelerates the study of low-abundance biological molecules.
Related Concept Videos
RACE - Rapid Amplification of cDNA Ends
Rapid Amplification of cDNA Ends, or RACE, is one of the most effective methods to obtain a full-length cDNA from an mRNA sequence between a known internal region to the unknown sequence at the 5’ or 3’ end. The unknown region is cloned in the cDNA by a gene-specific primer that binds the known end, and a hybrid primer that attaches a predefined anchor sequence to the unknown end of the cDNA. The sequence in between is amplified by PCR with an anchor primer and a gene-specific primer.
Since the...
Since the...
PCR
Overview

