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Published on: May 27, 2020
Geometry optimization using tuned and balanced redistributed charge schemes for combined quantum mechanical and
1Department of Chemistry and Supercomputing Institute, University of Minnesota, 207 Pleasant Street S.E., Minneapolis, MN 55455-0431, USA.
New algorithms improve quantum mechanical and molecular mechanical (QM/MM) boundary treatments. The tuned and balanced redistributed charge (TBRC2) and tuned and balanced smeared redistributed charge (TBSRC) schemes offer accurate QM/MM calculations, crucial for polar bonds.
Area of Science:
- Computational Chemistry
- Quantum Mechanics
- Molecular Mechanics
Background:
- Combined quantum mechanical and molecular mechanical (QM/MM) methods are essential for simulating large molecular systems.
- Accurate treatment of the QM/MM boundary is critical for reliable results.
- Existing charge redistribution algorithms have limitations in representing electrostatic interactions at the QM/MM interface.
Purpose of the Study:
- To develop and evaluate new algorithms for treating the QM/MM boundary.
- To improve the accuracy of QM/MM calculations, particularly for systems with polar bonds.
- To enhance the realistic representation of electrostatic interactions across the QM/MM interface.
Main Methods:
- Geometry optimizations using tuned and balanced redistributed charge algorithms.
- Implementation of the tuned and balanced redistributed charge-2 (TBRC2) scheme.
- Development and implementation of the tuned and balanced smeared redistributed charge (TBSRC) scheme, incorporating charge smearing.
- Testing schemes on various bond types (C-C, C-N, C-O, etc.) at the QM/MM boundary.
Main Results:
- Both TBRC2 and TBSRC schemes show excellent agreement with full QM calculations.
- Mean unsigned error (MUE) for deprotonation energy is 1.6 kcal/mol for both schemes.
- MUE for optimized bond lengths near the boundary is 0.015 Å for TBRC2 and 0.021 Å for TBSRC.
- Charge smearing in TBSRC is beneficial when redistributed charges are close to the QM region.
Conclusions:
- The TBRC2 and TBSRC schemes provide accurate and reliable QM/MM boundary treatments.
- These new schemes are particularly important for QM/MM boundaries passing through polar bonds.
- The developed methods significantly improve the accuracy of QM/MM simulations, enabling more precise molecular modeling.
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