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Related Concept Videos

Proteomics01:33

Proteomics

A proteome is the entire set of proteins that a cell type produces. We can study proteomes using the knowledge of genomes because genes code for mRNAs, and the mRNAs encode proteins. Although mRNA analysis is a step in the right direction, not all mRNAs are translated into proteins.
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term proteomics...
Tagging and Fusion Proteins01:24

Tagging and Fusion Proteins

Proteins are involved in several cellular processes and biochemical reactions. Analyzing a specific protein of interest requires it to be isolated from the other proteins in the cell. This is achieved by overexpressing the specific gene in a suitable host to produce large quantities of the target protein. A tag or label is recombined with the gene to produce a fusion protein containing the target protein and the tag. The tags on these fusion proteins can then be used for easy detection and...

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Related Experiment Video

Updated: Jun 2, 2026

Paramagnetic Relaxation Enhancement for Detecting and Characterizing Self-Associations of Intrinsically Disordered Proteins
07:24

Paramagnetic Relaxation Enhancement for Detecting and Characterizing Self-Associations of Intrinsically Disordered Proteins

Published on: September 23, 2021

Membrane protein structure determination using paramagnetic tags.

Soumya Ganguly1, Brian E Weiner, Jens Meiler

  • 1Departments of Chemistry, Pharmacology, and Biomedical Informatics, Center for Structural Biology, Institute for Chemical Biology, Vanderbilt University, 7330 Stevenson Center, Station B 351822, Nashville, TN 37235, USA.

Structure (London, England : 1993)
|April 13, 2011
PubMed
Summary
This summary is machine-generated.

Paramagnetic tagging combined with NMR or EPR spectroscopy can revolutionize helical membrane protein structure determination. Optimal labeling and topology prediction are key to unlocking this technique's full potential for structural biology.

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Determining Membrane Protein Topology Using Fluorescence Protease Protection (FPP)
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Determining Membrane Protein Topology Using Fluorescence Protease Protection (FPP)

Published on: April 20, 2015

Related Experiment Videos

Last Updated: Jun 2, 2026

Paramagnetic Relaxation Enhancement for Detecting and Characterizing Self-Associations of Intrinsically Disordered Proteins
07:24

Paramagnetic Relaxation Enhancement for Detecting and Characterizing Self-Associations of Intrinsically Disordered Proteins

Published on: September 23, 2021

Determining Membrane Protein Topology Using Fluorescence Protease Protection (FPP)
08:14

Determining Membrane Protein Topology Using Fluorescence Protease Protection (FPP)

Published on: April 20, 2015

Area of Science:

  • Biophysics
  • Structural Biology
  • Biochemistry

Background:

  • Helical membrane proteins are crucial in biological processes but challenging to study structurally.
  • Paramagnetic tagging combined with Nuclear Magnetic Resonance (NMR) or Electron Paramagnetic Resonance (EPR) spectroscopy offers a powerful approach for de novo structure determination.

Discussion:

  • This work addresses the need for optimal labeling strategies in paramagnetic tagging.
  • It highlights the importance of predicting membrane protein topology from sparse, low-resolution distance restraints.

Key Insights:

  • The integration of paramagnetic tagging with NMR/EPR spectroscopy can significantly advance the de novo structure determination of helical membrane proteins.
  • Effective structure elucidation relies on sophisticated labeling techniques and accurate topological predictions.

Outlook:

  • Further development in labeling strategies and computational methods will enhance the application of these spectroscopic techniques.
  • This approach holds promise for detailed structural insights into membrane protein function and drug discovery.