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Updated: Jun 2, 2026

Optical Clearing and Labeling for Light-sheet Fluorescence Microscopy in Large-scale Human Brain Imaging
Published on: January 26, 2024
Sparsity-driven reconstruction for FDOT with anatomical priors
Jean-Charles Baritaux1, Kai Hassler, Martina Bucher
1Swiss Federal Institute of Technology of Lausanne, 1015 Lausanne, Switzerland. jean-charles.baritaux@epfl.ch
Abstract:
In this paper we propose a method based on (2, 1)-mixed-norm penalization for incorporating a structural prior in FDOT image reconstruction. The effect of (2, 1)-mixed-norm penalization is twofold: first, a sparsifying effect which isolates few anatomical regions where the fluorescent probe has accumulated, and second, a regularization effect inside the selected anatomical regions. After formulating the reconstruction in a variational framework, we analyze the resulting optimization problem and derive a practical numerical method tailored to (2, 1)-mixed-norm regularization. The proposed method includes as particular cases other sparsity promoting regularization methods such as l(1)-norm penalization and total variation penalization. Results on synthetic and experimental data are presented.
