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Updated: Jun 2, 2026

Detection and Quantification of Mono-Rhamnolipids and Di-Rhamnolipids Produced by Pseudomonas aeruginosa
Published on: March 29, 2024
Novel des-fatty acyl-polymyxin B derivatives with Pseudomonas aeruginosa-specific antimicrobial activity
Yuki Sato1, Mitsuno Shindo, Naoki Sakura
1Faculty of Pharmaceutical Sciences, Hokuriku University, Ishikawa, Japan. y-satoh@hokuriku-u.ac.jp
Abstract:
Polymyxin B (PMB) is a cationic cyclic decapeptide antibiotic with a fatty acyl (FA) modification at the α-amino group of Dab¹ (Dab: L-α,γ-diaminobutyric acid). In this study, which is part of a series of PMB structure-activity relationship investigations focused on identifying clinically useful peptide antibiotics, we synthesized ten des-FA PMB derivatives whose N-terminal moieties were changed to basic or hydrophilic amino acids. The antimicrobial and lipopolysaccharide (LPS) binding activities of these synthetic analogs were tested. The analogs showed more potent antimicrobial activity against Pseudomonas aeruginosa (P. aeruginosa) compared with the PMB nonapeptide. In particular, [Ser²-Dap³]-PMB(2-10), Guanyl-[Thr²-Dab³]-PMB(2-10), Guanyl-[Dab¹-Thr²-Dab³]-PMB(1-10), and N(α,γ)-diguanyl-[Dap³]-PMB(3-10) had antimicrobial activity equivalent to PMB. In LPS binding assays, the displacement curves shifted in a manner proportional to the number of positive charges available to bind to Escherichia coli (E. coli) and P. aeruginosa. Furthermore, peptides with basic side chains were comparable to PMB in binding activity assays against E. coli and P. aeruginosa. The acute toxicities of the peptides were evaluated by intravenously administering the peptides to mice through the tail vein. The toxicities of [Ser²-Dap³]-PMB(2-10), [Dap³]-PMB(3-10), and [Ser³]-PMB(3-10) were lower that of PMB (LD₅₀, 4.8 µmol/kg).
Insights
Researchers modified Polymyxin B (PMB) by altering its N-terminal fatty acyl group. Some derivatives showed enhanced antimicrobial activity against Pseudomonas aeruginosa and reduced toxicity in mice, offering potential for new peptide antibiotics.
Area of Science:
- Medicinal Chemistry
- Microbiology
- Pharmacology
Background:
- Polymyxin B (PMB) is a critical cationic cyclic decapeptide antibiotic.
- PMB features a fatty acyl (FA) modification at the α-amino group of Dab¹.
- Structure-activity relationship studies are vital for developing novel peptide antibiotics.
Purpose of the Study:
- To synthesize and evaluate des-fatty acyl Polymyxin B derivatives.
- To investigate the impact of N-terminal modifications on antimicrobial and lipopolysaccharide (LPS) binding activities.
- To assess the in vivo acute toxicity of novel PMB analogs.
Main Methods:
- Synthesis of ten des-FA PMB derivatives with varied N-terminal moieties.
- Antimicrobial activity testing against Pseudomonas aeruginosa.
- Lipopolysaccharide (LPS) binding assays using Escherichia coli and P. aeruginosa.
- Acute toxicity evaluation in mice via intravenous administration.
Main Results:
- Several analogs exhibited potent antimicrobial activity against P. aeruginosa, some equivalent to PMB.
- LPS binding activity correlated with the number of positive charges available for binding.
- Peptides with basic side chains showed comparable LPS binding to PMB.
- Specific derivatives like [Ser²-Dap³]-PMB(2-10) demonstrated significantly lower acute toxicity than PMB.
Conclusions:
- N-terminal modification of PMB can yield analogs with improved antimicrobial efficacy and reduced toxicity.
- Charge and basic side chains are crucial for LPS binding and antimicrobial activity.
- These findings contribute to the development of safer and more effective Polymyxin B-based antibiotics.
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