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Updated: Jun 1, 2026

A Tissue Clearing Method for Neuronal Imaging from Mesoscopic to Microscopic Scales
Published on: May 10, 2022
Rapid confocal imaging of large areas of excised tissue with strip mosaicing
Sanjee Abeytunge1, Yongbiao Li, Bjorg Larson
1Memorial Sloan-Kettering Cancer Center, Research Engineering Laboratory, 430 East 67th Street, RRL513, New York, New York 10065, USA.
Abstract:
Imaging large areas of tissue rapidly and with high resolution may enable rapid pathology at the bedside. The limited field of view of high-resolution microscopes requires the merging of multiple images that are taken sequentially to cover a large area. This merging or mosaicing of images requires long acquisition and processing times, and produces artifacts. To reduce both time and artifacts, we developed a mosaicing method on a confocal microscope that images morphology in large areas of excised tissue with sub-cellular detail. By acquiring image strips with aspect ratios of 10:1 and higher (instead of the standard ~1:1) and "stitching" them in software, our method images 10 × 10 mm(2) area of tissue in about 3 min. This method, which we call "strip mosaicing," is currently three times as fast as our previous method.
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