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Detection and Genogrouping of Noroviruses from Children's Stools By Taqman One-step RT-PCR
Published on: July 22, 2012
Epidemiological and clinical characteristics of pediatric gastroenteritis associated with new viral agents
Sara Giordana Rimoldi1, Fabrizio Stefani, Cristina Pagani
1Microbiology Unit, University Hospital L. Sacco, Milan, Italy. Rimoldi.sara@hsacco.it
Insights
Human rotavirus (HRV) was the most common cause of pediatric gastroenteritis in a Milan study. Norovirus (NoV) and human bocavirus (HBoV) were also significant, often co-infecting patients.
Area of Science:
- Pediatric Infectious Diseases
- Virology
- Gastroenterology
Background:
- Gastroenteritis is a common pediatric illness.
- Viral pathogens are frequent causes of gastroenteritis in children.
- Understanding the prevalence and characteristics of different viruses is crucial for public health.
Purpose of the Study:
- To investigate the incidence of various viral pathogens in pediatric gastroenteritis.
- To analyze the clinical presentation and severity of infections.
- To characterize norovirus strains identified in the study population.
Main Methods:
- A 22-month prospective study of 273 pediatric patients with gastroenteritis.
- Fecal sample analysis using molecular methods for rotavirus (HRV), norovirus (NoV), adenovirus (AdV), sapovirus (SaV), and human bocavirus (HBoV).
- Clinical data collection and scoring using the Ruska-Vesikari system for 109 patients; nucleotide sequencing for NoV samples.
Main Results:
- Human rotavirus (HRV) showed the highest incidence (38.3%), followed by norovirus (NoV) (16.2%), human bocavirus (HBoV) (13.6%), adenovirus (AdV) (2.6%), and sapovirus (SaV) (0.6%).
- Common symptoms included diarrhea (96%), vomiting (78%), and fever (80%).
- Mixed infections involving NoV, HRV, and HBoV occurred in 13.1% of cases. Adenovirus infections were less severe than those caused by NoV, HRV, and HBoV. NoV sequencing identified GII.2, GII.3, and GII.4 2006 variants.
Conclusions:
- Human rotavirus is the predominant viral cause of gastroenteritis in this pediatric cohort.
- Norovirus and human bocavirus are significant contributors to pediatric gastroenteritis, often presenting with similar clinical symptoms.
- Mixed viral infections are common and complicate clinical diagnosis.
- Molecular characterization of norovirus revealed specific GII variants circulating during the study period.
Abstract:
A 22-month study (2008-2009) was carried out on 273 patients (average age 40 months), admitted with gastroenteritis to the Pediatric Unit of L. Sacco University Hospital in Milan, Italy. Fecal samples were investigated for rotavirus (HRV), norovirus (NoV), adenovirus (AdV), sapovirus (SaV), enterovirus, astrovirus and bocavirus (HBoV). A 38.3% incidence of infection was observed for HRV, followed by NoV (16.2%), HBoV (13.6%), AdV (2.6%) and SaV (0.6%). Clinical evaluation of 109 gastroenteritis patients with confirmed diagnosis was graded by the Ruska-Vesikari scoring system, showing vomiting (78%), diarrhea (96%) and fever (80%). A total of 25 NoV-positive samples were selected for nucleotide sequence analysis. The severity of AdV-associated infection was lower than for NoV, HRV and HBoV. These latter viruses caused similar symptoms that were indistinguishable using clinical information. NoV, HRV and HBoV were often present as mixed infections (13.1%). Sequencing of NoV-positive samples allowed identification of GII.2, GII.3 and GII.4 2006 variants.
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