Related Experiment Video
Updated: May 31, 2026

Probing C84-embedded Si Substrate Using Scanning Probe Microscopy and Molecular Dynamics
Published on: September 28, 2016
Simulation of multiple ordered phases in C23 n-alkane
Nathaniel Wentzel1, Scott T Milner
1Department of Chemical Engineering, Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Abstract:
Normal alkanes display multiple ordered phases, including an orthorhombic crystal (X) and two partially ordered rotator phases (RI and RII). The rotator phase transitions X-RI and RI-RII are of interest because they are weakly first-order, and because experiments suggest that crystalline polyethylene may nucleate via a metastable rotator phase. We have performed heating and cooling scans of all-atom NσT (isothermal, isostress) simulations of a pure C(23) solid. We find a sequence of phases, transition temperatures, structural and thermodynamic properties, all reasonably consistent with experiment, except that a monoclinic crystal is more stable in our simulations than the experimental orthorhombic structure. We find that the RI phase is well described as an orthorhombic crystal disordered by random ±90° rotations of molecules about their stem axis, and the RII phase can be represented as a loose hexagonal packing of parallel chain stems, which tend to orient with the in-plane projection of C-C bonds pointing between neighbors. To measure local orthorhombic, RI, or RII order, we define Potts- and Ising-like order parameters, from which global order parameters and correlation functions can be computed. We observe modest pretransitional fluctuations of local RI order in the RII phase near T(RI-RII), characteristic of this weakly first-order transition.
More Related Videos
Related Concept Videos
Conformations of Cycloalkanes
¹H NMR of Conformationally Flexible Molecules: Temporal Resolution
Mass Spectrometry: Long-Chain Alkane Fragmentation
Nomenclature of Alkanes
The alkane nomenclature considers the length of the carbon chain, the number, and the location of the substituent to arrive at its systematic name. The IUPAC...
Structure of Alkanes
Hydrocarbons are the simplest organic compounds composed of carbons and hydrogens. Based on the bond order between carbons, the hydrocarbons are further classified into alkanes, alkenes, and alkynes.
Alkanes are the simplest hydrocarbons with sp3 hybrid carbon atoms. These sp3...
Stereoisomerism of Cyclic Compounds

