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Updated: May 31, 2026

Lipid Droplet Isolation for Quantitative Mass Spectrometry Analysis
Published on: April 17, 2017
Inhibition of cyclophilins alters lipid trafficking and blocks hepatitis C virus secretion
Leah J Anderson1, Kai Lin, Teresa Compton
1Novartis Institutes for Biomedical Research, Inc Cambridge, Massachusetts 02139, USA.
Abstract:
Host cyclophilin (cyp) inhibitors, such as NIM811, efficiently inhibit replication of hepatitis C virus (HCV) and have shown significant promise in recent clinical trials for the treatment of chronic HCV. It is therefore important to fully understand the mechanism of action of these therapeutic agents. Data obtained from comprehensive systems biology approaches have led to the hypothesis that the antiviral activity of cyclophilin inhibitors is mediated through impairing the cellular machinery on which HCV relies to traffic cofactors necessary for formation of the replication complex. Indeed, our results demonstrate when cyclophilins are inhibited by NIM811, lipid and protein trafficking within the VLDL pathway is impaired. Following treatment of replicon or HCV infected cells with NIM811, intracellular lipid droplets (LD) more than double in size and decrease in number. Changes in the LDs in response to cyclophilin inhibition are dependent upon expression of viral proteins. Additionally, in cells treated with NIM811, apoB accumulates in a crescent or ring shaped structure surrounding the enlarged LDs and is no longer secreted. Silencing of cypA or cyp40 using siRNA had a similar effect on LD size and apoB localization as compound treatment, suggesting these cyclophilins may play an important role in lipid and apoB trafficking. Interestingly, the decrease in apoB secretion correlates with a decrease in release of viral particles in HCV infected cells. Altogether, these results add a new level of complexity to the mechanism of action of cyclophilin inhibition, and suggest the role for cyclophilins in the virus life cycle extends beyond replication to virus release.
Insights
Host cyclophilin inhibitors like NIM811 disrupt hepatitis C virus (HCV) replication by impairing lipid and protein trafficking, affecting virus release. This reveals a broader role for cyclophilins in the HCV life cycle beyond replication.
Area of Science:
- Virology
- Cell Biology
- Biochemistry
Background:
- Host cyclophilin (cyp) inhibitors, such as NIM811, are promising therapeutics for chronic hepatitis C virus (HCV) infection.
- Understanding the precise mechanism of action of these inhibitors is crucial for optimizing HCV treatment strategies.
Purpose of the Study:
- To elucidate the mechanism by which cyclophilin inhibitors exert their antiviral effects against HCV.
- To investigate the impact of cyclophilin inhibition on cellular lipid and protein trafficking pathways essential for HCV replication and release.
Main Methods:
- Treatment of HCV replicon or infected cells with NIM811.
- Analysis of intracellular lipid droplet (LD) size and number.
- Assessment of apolipoprotein B (apoB) localization and secretion.
- Silencing of cyclophilins (cypA, cyp40) using siRNA.
- Quantification of viral particle release.
Main Results:
- NIM811 treatment significantly increased the size and decreased the number of intracellular LDs in HCV-infected cells.
- ApoB accumulated around enlarged LDs and its secretion was impaired upon cyclophilin inhibition.
- Silencing cypA or cyp40 mimicked the effects of NIM811 on LDs and apoB.
- Impaired apoB secretion correlated with reduced release of infectious HCV particles.
Conclusions:
- Cyclophilin inhibition by NIM811 disrupts lipid and protein trafficking, specifically affecting the VLDL pathway.
- Cyclophilins (cypA, cyp40) play a critical role in regulating LD dynamics and apoB secretion.
- The antiviral mechanism of cyclophilin inhibitors extends to impairing HCV particle release, not just replication.
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