Related Experiment Video
Updated: May 31, 2026

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
Published on: December 7, 2021
Percolation in networks composed of connectivity and dependency links
Amir Bashan1, Roni Parshani, Shlomo Havlin
1Department of Physics, Bar-Ilan University, Ramat Gan, Israel.
Abstract:
Networks composed from both connectivity and dependency links were found to be more vulnerable compared to classical networks with only connectivity links. Their percolation transition is usually of a first order compared to the second-order transition found in classical networks. We analytically analyze the effect of different distributions of dependencies links on the robustness of networks. For a random Erdös-Rényi (ER) network with average degree k that is divided into dependency clusters of size s, the fraction of nodes that belong to the giant component P(∞) is given by P(∞)=p(s-1)[1-exp(-kpP(∞))](s), where 1-p is the initial fraction of removed nodes. Our general result coincides with the known Erdös-Rényi equation for random networks for s=1. For networks with Poissonian distribution of dependency links we find that P(∞) is given by P(∞)=f(k,p)(P(∞))e(([s]-1)[pf(k,p)(P(∞))-1]), where f(k,p)(P(∞))≡1-exp(-kpP(∞)) and [s] is the mean value of the size of dependency clusters. For networks with Gaussian distribution of dependency links we show how the average and width of the distribution affect the robustness of the networks.
Related Concept Videos
Circuit Terminology
A circuit, on the other hand, is also an interconnected system of electrical elements but must contain one or more closed paths.
Types of Coprecipitation
Sometimes, ions in a crystal lattice can undergo isomorphous replacement by inclusions of similar charge and size. For...
Network Covalent Solids
To break or to melt a covalent network solid, covalent bonds must be broken. Because covalent bonds are relatively strong, covalent network solids are typically...
Contact-dependent Signaling
Gap Junctions
In animal cells, gap junctions are formed...
Multiple Pipe Systems
Series Configuration
In a series configuration, fluid flows sequentially from one pipe...
Protein Networks
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...