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Association of Tumor Suppressor Protein Pdcd4 With Ribosomes Is Mediated by Protein-Protein and Protein-RNA
Lena Wedeken1, Johanna Ohnheiser, Benjamin Hirschi
1Institute for Biochemistry, Westfälische-Wilhelms-Universität Münster, Münster, Germany.
Abstract:
The Pdcd4 (programmed cell death gene 4) gene has been implicated as a novel tumor suppressor gene in the development of several types of human cancer. The Pdcd4 protein is believed to act as a translation suppressor of mRNAs containing structured 5' UTRs. Pdcd4 contains 2 copies of so-called MA3 domains that mediate tight interactions with the translation initiation factor eIF4A, resulting in the inhibition of the eIF4A helicase activity. The N-terminal part of Pdcd4, which has been less well characterized, binds RNA in vitro, but as yet, it has not been clear whether RNA binding by Pdcd4 plays a role in vivo. Here, the authors have identified 2 highly conserved clusters of basic amino acid residues that are essential for the RNA binding activity of Pdcd4. They also show that a substantial fraction of Pdcd4 is present, together with small ribosomal subunits, in translation preinitiation complexes. Using mutants that disrupt RNA binding or the Pdcd4-eIF4A interaction, they demonstrate that the ribosomal association of Pdcd4 is dependent on its RNA binding activity as well as on its ability to interact with eIF4A. Their work provides the first direct evidence for an essential role of the Pdcd4 RNA binding activity in vivo and suggests that RNA binding is required for recruiting Pdcd4 to the translation machinery.
Insights
Programmed cell death gene 4 (Pdcd4) acts as a tumor suppressor by inhibiting translation. This study shows Pdcd4
Area of Science:
- Molecular Biology
- Cancer Research
- Gene Regulation
Background:
- Programmed cell death gene 4 (Pdcd4) is a tumor suppressor involved in various cancers.
- Pdcd4 inhibits translation of specific mRNAs by interacting with the eIF4A translation initiation factor.
- The role of Pdcd4's N-terminal RNA-binding activity in vivo was previously unclear.
Purpose of the Study:
- To investigate the in vivo function of Pdcd4's RNA-binding activity.
- To elucidate the mechanism by which Pdcd4 associates with the translation machinery.
Main Methods:
- Identification of conserved residues essential for Pdcd4 RNA binding.
- Analysis of Pdcd4 localization within translation preinitiation complexes.
- Utilizing mutants to assess the impact of RNA binding and eIF4A interaction disruption.
Main Results:
- Two conserved basic amino acid clusters are critical for Pdcd4 RNA binding.
- Pdcd4 is found in translation preinitiation complexes with small ribosomal subunits.
- Ribosomal association of Pdcd4 requires both RNA binding and eIF4A interaction.
Conclusions:
- Pdcd4 RNA binding is essential for its in vivo function.
- RNA binding is necessary for recruiting Pdcd4 to the translation machinery.
- This study clarifies a key aspect of Pdcd4's tumor suppressor mechanism.
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