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Updated: May 30, 2026

Lighting Up the Pathways to Caspase Activation Using Bimolecular Fluorescence Complementation
Published on: March 5, 2018
The holo-apoptosome: activation of procaspase-9 and interactions with caspase-3
Shujun Yuan1, Xinchao Yu, John M Asara
1Department of Physiology and Biophysics, Boston University School of Medicine, 700 Albany Street, Boston, MA 02118-2526, USA.
Insights
The apoptosome
Area of Science:
- Cell Biology
- Biochemistry
- Molecular Biology
Background:
- The intrinsic cell death pathway is crucial for cellular homeostasis.
- Activation of procaspase-9 (PC-9) on the apoptosome is a key regulatory step.
Purpose of the Study:
- To elucidate the structural organization of the apoptosome.
- To understand the mechanism of procaspase-9 activation.
- To investigate the interaction between procaspase-9 and caspase-3.
Main Methods:
- 3D reconstruction of the apoptosome without symmetry restraints.
- Analysis of caspase recruitment domains (CARDs) and catalytic domains.
- Investigation of linker roles in procaspase-9 activation.
Main Results:
- Evidence for a CARD-CARD disk formed by PC-9 and Apaf-1, tethered to the apoptosome.
- A novel asymmetric proteolysis machine formed by disk assembly and PC-9 binding.
- Identification of critical roles for CARD-p20 and p20-p10 linkers in PC-9 activation.
- Overlapping binding sites for PC-9 and caspase-3 on the apoptosome's central hub.
Conclusions:
- A proximity-induced association model for PC-9 activation on the apoptosome is proposed.
- Overlapping binding sites suggest potential for hybrid apoptosomes with combined proteolytic activities.
Abstract:
Activation of procaspase-9 on the apoptosome is a pivotal step in the intrinsic cell death pathway. We now provide further evidence that caspase recruitment domains of pc-9 and Apaf-1 form a CARD-CARD disk that is flexibly tethered to the apoptosome. In addition, a 3D reconstruction of the pc-9 apoptosome was calculated without symmetry restraints. In this structure, p20 and p10 catalytic domains of a single pc-9 interact with nucleotide binding domains of adjacent Apaf-1 subunits. Together, disk assembly and pc-9 binding create an asymmetric proteolysis machine. We also show that CARD-p20 and p20-p10 linkers play important roles in pc-9 activation. Based on the data, we propose a proximity-induced association model for pc-9 activation on the apoptosome. We also show that pc-9 and caspase-3 have overlapping binding sites on the central hub. These binding sites may play a role in pc-3 activation and could allow the formation of hybrid apoptosomes with pc-9 and caspase-3 proteolytic activities.
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