Genome-wide screening for genes associated with FK506 sensitivity in fission yeast

Yan Ma1, Weijuan Jiang, Qingbin Liu

  • 1Division of Molecular Pharmacology and Pharmacogenomics, Department of Biochemistry and Molecular Biology, Kobe University Graduate School of Medicine, Kobe, Japan. mayan@med.kobe-u.ac.jp

Plos One
|August 19, 2011
PubMed

Insights

Researchers identified 72 nonessential genes in fission yeast related to the calcineurin pathway by screening for FK506 sensitivity. These genes impact various cellular processes, including membrane trafficking and signal transduction, revealing calcineurin

Area of Science:

  • Cell Biology
  • Molecular Biology
  • Genetics

Background:

  • The calcineurin signaling pathway regulates numerous cellular processes.
  • FK506 (tacrolimus) is an immunosuppressive drug that inhibits calcineurin.
  • Understanding calcineurin's role requires identifying functionally related genes.

Purpose of the Study:

  • To identify nonessential genes functionally related to the calcineurin signaling pathway in fission yeast.
  • To investigate the involvement of calcineurin in membrane trafficking and cell wall integrity.

Main Methods:

  • Genome-wide screen of 3004 haploid deletion strains for FK506 sensitivity.
  • Classification of 72 identified FK506-sensitive genes into functional groups.
  • Analysis of vacuolar fusion, v-SNARE Syb1 localization, and micafungin sensitivity in selected strains.

Main Results:

  • 72 deletion strains showed hypersensitivity to FK506, implicating these genes in calcineurin signaling.
  • Identified genes involved in membrane trafficking, signal transduction, ubiquitination, chromatin remodeling, and other functions.
  • Observed defects in vacuolar fusion and Syb1 localization in a subset of FK506-sensitive strains, with 16 strains sensitive to micafungin.

Conclusions:

  • Calcineurin mediates diverse physiological processes in fission yeast.
  • Calcineurin signaling is extensively involved in cross-talk with other cellular pathways.
  • The identified genes provide new insights into calcineurin function and regulation.