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Updated: May 30, 2026

Mating-based Overexpression Library Screening in Yeast
Published on: July 6, 2018
Genome-wide screening for genes associated with FK506 sensitivity in fission yeast
Yan Ma1, Weijuan Jiang, Qingbin Liu
1Division of Molecular Pharmacology and Pharmacogenomics, Department of Biochemistry and Molecular Biology, Kobe University Graduate School of Medicine, Kobe, Japan. mayan@med.kobe-u.ac.jp
Abstract:
We have been studying calcineurin signal transduction pathway in fission yeast Schizosaccharomyces pombe (S. pombe) by developing a genetic screen for mutants that show hypersensitivity to the immunosuppressive calcineurin inhibitor FK506 (tacrolimus). In the present study, to identify nonessential genes that are functionally related to the calcineurin signaling pathway, we performed a genome-wide screen of 3004 haploid deletion strains and confirmed 72 deletion strains to be FK506 sensitive. These 72 genes are classified into nine functional groups to include membrane trafficking (16 genes), signal transduction (10 genes), ubiquitination (8 genes), chromatin remodeling (6 genes), cytokinesis (4 genes), ribosomal protein (3 genes), RNA binding protein (3 genes), and a variety of other known functions (17 genes) or still unknown functions (5 genes) in the biological system. In our previous screening of FK506-sensitive mutants we isolated several membrane-trafficking mutants showing defective cell wall integrity. Here, we further examined the vacuolar fusion, the v-SNARE synaptobrevin Syb1 localization, and the sensitivity to the β-glucan synthase inhibitor micafungin in these 72 FK506-sensitive strains. Results showed that 25 deletion strains exhibited abnormal vacuole fusion, 19 deletion strains exhibited Syb1 mislocalization, and 14 deletion strains exhibited both abnormal vacuole fusion and Syb1 mislocalization, while 42 deletion strains showed both normal vacuole fusion and Syb1 localization. Likewise, 16 deletion strains showed sensitivity to micafungin. Altogether, our present study indicates that calcineurin mediates a plethora of physiological processes in fission yeast, and that calcineurin is extensively involved in cross-talk between signaling pathways.
Insights
Researchers identified 72 nonessential genes in fission yeast related to the calcineurin pathway by screening for FK506 sensitivity. These genes impact various cellular processes, including membrane trafficking and signal transduction, revealing calcineurin
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- The calcineurin signaling pathway regulates numerous cellular processes.
- FK506 (tacrolimus) is an immunosuppressive drug that inhibits calcineurin.
- Understanding calcineurin's role requires identifying functionally related genes.
Purpose of the Study:
- To identify nonessential genes functionally related to the calcineurin signaling pathway in fission yeast.
- To investigate the involvement of calcineurin in membrane trafficking and cell wall integrity.
Main Methods:
- Genome-wide screen of 3004 haploid deletion strains for FK506 sensitivity.
- Classification of 72 identified FK506-sensitive genes into functional groups.
- Analysis of vacuolar fusion, v-SNARE Syb1 localization, and micafungin sensitivity in selected strains.
Main Results:
- 72 deletion strains showed hypersensitivity to FK506, implicating these genes in calcineurin signaling.
- Identified genes involved in membrane trafficking, signal transduction, ubiquitination, chromatin remodeling, and other functions.
- Observed defects in vacuolar fusion and Syb1 localization in a subset of FK506-sensitive strains, with 16 strains sensitive to micafungin.
Conclusions:
- Calcineurin mediates diverse physiological processes in fission yeast.
- Calcineurin signaling is extensively involved in cross-talk with other cellular pathways.
- The identified genes provide new insights into calcineurin function and regulation.

