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Targeted in Situ Mutagenesis of Histone Genes in Budding Yeast
Published on: January 26, 2017
The Y641C mutation of EZH2 alters substrate specificity for histone H3 lysine 27 methylation states
Tim J Wigle1, Sarah K Knutson, Lei Jin
1Epizyme, Inc., 325 Vassar St., Cambridge, MA 02139, USA. twigle@epizyme.com
Abstract:
Mutations at tyrosine 641 (Y641F, Y641N, Y641S and Y641H) in the SET domain of EZH2 have been identified in patients with certain subtypes of non-Hodgkin lymphoma (NHL). These mutations were shown to change the substrate specificity of EZH2 for various methylation states of lysine 27 on histone H3 (H3K27). An additional mutation at EZH2 Y641 to cysteine (Y641C) was also found in one patient with NHL and in SKM-1 cells derived from a patient with myelodisplastic syndrome (MDS). The Y641C mutation has been reported to dramatically reduce enzymatic activity. Here, we demonstrate that while the Y641C mutation ablates enzymatic activity against unmethylated and monomethylated H3K27, it is superior to wild-type in catalyzing the formation of trimethylated H3K27 from the dimethylated precursor.
Insights
Mutations in the EZH2 gene, specifically at tyrosine 641, are linked to non-Hodgkin lymphoma. The Y641C mutation alters histone methylation patterns, impacting enzyme activity in specific contexts.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- Mutations at tyrosine 641 (Y641) in the enhancer of zeste homolog 2 (EZH2) gene are recurrent in certain non-Hodgkin lymphomas (NHL).
- These EZH2 Y641 mutations affect substrate specificity for histone H3 lysine 27 (H3K27) methylation states.
- The Y641C mutation, identified in NHL and myelodysplastic syndrome (MDS) contexts, was previously reported to reduce EZH2 enzymatic activity.
Purpose of the Study:
- To investigate the enzymatic activity of the EZH2 Y641C mutation.
- To characterize the substrate specificity of EZH2 Y641C in comparison to wild-type EZH2.
- To understand the impact of the Y641C mutation on H3K27 methylation dynamics.
Main Methods:
- Enzymatic assays using wild-type and mutant EZH2 proteins.
- Analysis of H3K27 methylation states (un-, mono-, di-, and trimethylated) as substrates and products.
- Comparison of catalytic efficiency for different methylation states.
Main Results:
- The EZH2 Y641C mutation significantly reduces enzymatic activity towards unmethylated and monomethylated H3K27.
- Conversely, the Y641C mutation demonstrates enhanced activity in catalyzing the formation of trimethylated H3K27 from its dimethylated precursor.
- This indicates a specific alteration in substrate preference rather than a complete loss of function.
Conclusions:
- The EZH2 Y641C mutation exhibits differential effects on H3K27 methylation, ablating activity on lower methylation states while enhancing trimethylation from dimethylation.
- These findings provide novel insights into the mechanistic consequences of EZH2 mutations in hematological malignancies.
- Understanding these specific enzymatic alterations is crucial for developing targeted therapies for EZH2-mutated cancers.
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