Molecular basis for the recognition of adenomatous polyposis coli by the Discs Large 1 protein
Zhenyi Zhang1, Hua Li, Leyi Chen
1State Key Laboratory of Microbial Metabolism, and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.
Abstract:
The human Discs Large 1 (DLG1) protein uses two of its three PDZ domains to interact with the C-terminal peptide of the Adenomatous Polyposis Coli (APC) tumor suppressor protein. The DLG1/APC complex inhibits the cell cycle progression from the G0/G1 to the S phase, regulates epithelial cell migration and morphogenesis, and is required for polarization of the microtubule cytoskeleton. However, the molecular details of how DLG1 recognizes APC is not clear. In this study, we performed biochemical and biophysical assays to investigate the interactions between PDZ domains of DLG1 and the C-terminal peptide of APC. In addition, we determined the crystal structures of the PDZ1 and PDZ2 domains of DLG1 each in complex with the C-terminal 11-residue peptide of APC. Our biochemical, biophysical, and structural results revealed structural elements and residues on PDZ1 and PDZ2 domains of DLG1 and on APC crucial for their mutual interaction. In particular, our results show that the β2/β3 loops of PDZ1 and PDZ2 play important roles in contributing to the binding affinities between PDZ domains and APC, through interacting with the residues upstream of the canonical PDZ-binding S/T-X-V motif. The results provide new insights into the binding mode of a defined C-terminal segment of APC by the PDZ domains of DLG1.
Insights
The Discs Large 1 (DLG1) protein interacts with the Adenomatous Polyposis Coli (APC) protein via its PDZ domains. This study reveals key structural details of DLG1-APC binding, highlighting the role of specific protein loops.
Area of Science:
- Molecular Biology
- Structural Biology
- Cancer Research
Background:
- The Discs Large 1 (DLG1) protein interacts with the Adenomatous Polyposis Coli (APC) tumor suppressor protein.
- The DLG1/APC complex plays roles in cell cycle regulation, epithelial cell migration, and microtubule cytoskeleton polarization.
- The precise molecular mechanism of DLG1 recognition of APC remains unclear.
Purpose of the Study:
- To investigate the molecular details of the interaction between DLG1 PDZ domains and the APC C-terminal peptide.
- To elucidate the structural basis of DLG1-APC complex formation.
Main Methods:
- Biochemical and biophysical assays were employed to study DLG1-APC interactions.
- Crystal structures of DLG1 PDZ1 and PDZ2 domains complexed with the APC C-terminal peptide were determined.
Main Results:
- Structural and biochemical data identified crucial residues and structural elements in DLG1 PDZ domains and APC for their interaction.
- The β2/β3 loops of DLG1 PDZ1 and PDZ2 domains were found to be critical for binding affinity.
- These loops interact with residues upstream of the canonical S/T-X-V motif in APC.
Conclusions:
- The study provides detailed structural insights into how DLG1 PDZ domains recognize a specific C-terminal segment of APC.
- The findings reveal the significant contribution of the β2/β3 loops in mediating DLG1-APC binding.
- This work enhances understanding of the molecular mechanisms underlying DLG1-APC complex function.
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