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Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
Microbiota Modulation by Antibiotics01:21

Microbiota Modulation by Antibiotics

Antibiotics have revolutionized modern medicine by saving countless lives from bacterial infections. However, their widespread use has inadvertently harmed the delicate balance of the human gut microbiota. The gut microbiota, a complex community of bacteria, archaea, viruses, and fungi, plays a vital role in regulating metabolism, immune responses, and maintaining intestinal health. Antibiotics, especially broad-spectrum types, disrupt this ecosystem by eradicating both harmful and beneficial...
The Oral Microbiota01:27

The Oral Microbiota

The oral microbiome includes a complex ecosystem comprising over 700 microbial species, identified through genomic sequencing and culture-based analyses to date. This community includes a core microbiome, found universally among individuals, and a variable component influenced by environmental factors such as diet, lifestyle, and host genetics. Site-specific conditions, including oxygen gradients, pH levels, and nutrient availability, determine the spatial distribution of these microorganisms...
Introduction to the Human Microbiota01:22

Introduction to the Human Microbiota

Microorganisms colonize various regions of the human body, including the mouth, nasal passages, throat, stomach, intestines, urogenital tract, and skin. The total number of microbial cells is estimated to range from 10¹³ to 10¹⁴—comparable to, or exceeding, the number of human somatic cells. This host–microbiome relationship has led to the conceptualization of humans as supraorganisms, wherein microbial communities perform vital roles in development, immunity, and disease...
Dysbiosis of the Gut Microbiota01:18

Dysbiosis of the Gut Microbiota

The human gut microbiome includes a diverse array of microbial species, including beneficial commensals and opportunistic pathogens, which interact to support host health. These microbes contribute to essential functions such as nutrient metabolism, immune system modulation, and maintenance of intestinal barrier integrity. However, disruptions to this equilibrium—referred to as dysbiosis—can have widespread physiological consequences.Dysbiosis is often characterized by reduced microbial...
Microbiome of the Eye01:22

Microbiome of the Eye

The human eye has a specialized microbiota that reflects its unique anatomical and immunological environment. This low-biomass microbial community predominantly colonizes the conjunctiva and eyelid margins, playing a vital role in ocular surface homeostasis and defense. Despite its proximity to the richly colonized facial skin, the ocular surface maintains a distinct microbial profile due to continuous mechanical and biochemical defense mechanisms.The conjunctival surface hosts fewer microbial...

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Related Experiment Video

Updated: May 30, 2026

An Adoptive Transfer Model of Rheumatoid Arthritis in Mice
07:37

An Adoptive Transfer Model of Rheumatoid Arthritis in Mice

Published on: June 6, 2025

The microbiome and rheumatoid arthritis.

Jose U Scher1, Steven B Abramson

  • 1Department of Medicine, Division of Rheumatology, New York University School of Medicine and NYU Hospital for Joint Diseases, 301 East 17th Street, New York, NY 10003, USA. jose.scher@nyumc.org

Nature Reviews. Rheumatology
|August 25, 2011
PubMed
Summary

The human microbiome, comprising trillions of microorganisms, plays a crucial role in health. Emerging research suggests this microbial community may influence the development of rheumatoid arthritis (RA), an autoimmune disorder.

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Area of Science:

  • Microbiome research
  • Immunology
  • Rheumatoid Arthritis pathogenesis

Background:

  • The human body hosts a vast microbiome, essential for physiological functions.
  • Rheumatoid arthritis (RA) is an autoimmune disorder with an unknown ultimate cause, likely involving genetic and environmental factors.
  • The gut microbiome is increasingly recognized as a significant environmental factor influencing autoimmune diseases.

Purpose of the Study:

  • To review historical evidence linking the microbiota to rheumatoid arthritis.
  • To explore how new technologies can investigate the microbiome's role in RA pathogenesis.
  • To highlight the potential of microbiome analysis in understanding autoimmune disease.

Main Methods:

  • Review of historical scientific literature.
  • Analysis of DNA sequence data from gut microbial communities.
  • Focus on advancements in mucosal immunology research.
  • Exploration of new technologies for microbiome investigation.

Main Results:

  • The microbiome significantly impacts host physiology and immunity.
  • The gut microbiome is a plausible environmental factor in autoimmune disease.
  • New technologies offer promising avenues for validating the microbiome's role in RA.

Conclusions:

  • The microbiome is integral to human health and evolution.
  • The gut microbiota may be a key environmental trigger in rheumatoid arthritis development.
  • Further research utilizing advanced technologies is needed to confirm the microbiome's role in RA pathogenesis.