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Updated: May 29, 2026

Two-photon axotomy and time-lapse confocal imaging in live zebrafish embryos
Published on: February 16, 2009
In vivo imaging and quantitative analysis of changes in axon length using transgenic zebrafish embryos
Jyotshnabala Kanungo1, Susan Lantz, Merle G Paule
1Division of Neurotoxicology, National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR 72079, USA. jyotshnabala.kanungo@fda.hhs.gov
Ethanol exposure during zebrafish development significantly reduces motor neuron axon length. This study presents a high-throughput imaging method for assessing axon development, crucial for drug screening and understanding neurodevelopmental effects.
Area of Science:
- Neuroscience
- Developmental Biology
- Pharmacology
Background:
- Axon development is critical for nervous system function.
- Ethanol exposure during development can negatively impact neuronal structure.
- Accurate measurement of axon length is essential for assessing neurotoxicity and developmental effects.
Purpose of the Study:
- To establish and validate an in vivo imaging procedure for measuring axon length in zebrafish embryos.
- To assess the impact of ethanol exposure on motor neuron axon length using this novel imaging technique.
- To demonstrate the utility of this method for high-throughput compound screening.
Main Methods:
- Automated fluorescent image acquisition using ImageXpress Micro high content screening reader.
- Axon length analysis performed with AcuityXpress software and Neurite Outgrowth Application module.
- Treatment of transgenic [hb9:GFP] zebrafish embryos with ethanol (2-2.5%) at 28 hours post-fertilization.
Main Results:
- High-dose ethanol treatment significantly reduced average axon lengths in zebrafish embryos compared to controls.
- No significant difference in axon lengths was observed between embryos incubated at 22°C and 28.5°C.
- The imaging procedure proved effective for time-efficient assessment of axon development.
Conclusions:
- The developed imaging procedure is a robust method for quantifying axon length in vivo.
- Ethanol exposure during early development impairs motor neuron axon elongation in zebrafish.
- This assay system enables efficient screening of compounds for neurodevelopmental toxicity.
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