Related Experiment Video
Updated: May 29, 2026

09:11
Assays for Validating Histone Acetyltransferase Inhibitors
Published on: August 6, 2020
N-terminal acetylation acts as an avidity enhancer within an interconnected multiprotein complex
Daniel C Scott1, Julie K Monda, Eric J Bennett
1Structural Biology Department, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Summary
N-terminal acetylation of the Ubc12 enzyme directs protein interactions and promotes cullin neddylation. This study reveals how N-terminal acetylation guides Ubc12
Area of Science:
- Molecular Biology
- Structural Biology
- Biochemistry
Background:
- Many eukaryotic proteins undergo N-terminal acetylation, but its role in mediating protein interactions is poorly understood.
- The E2 enzyme Ubc12 and the E3 ligase Dcn1 are key components in the neddylation pathway, which modifies the Cul1 protein.
Purpose of the Study:
- To elucidate the structural mechanisms by which N-terminal acetylation of Ubc12 influences its interaction with E3 ligases.
- To define the role of N-terminal acetylation in the E3-dependent ligation of Nedd8 to Cul1.
Main Methods:
- The study employed structural, biochemical, biophysical, and genetic analyses.
- Key techniques included X-ray crystallography, enzyme activity assays, and mutational studies.
Main Results:
- N-terminal acetylation of Ubc12 dictates its specific ligation to Cul1 via the E3 ligase Dcn1.
- Structural analysis revealed that the N-acetyl-methionine of Ubc12 is buried in a hydrophobic pocket of Dcn1, facilitating cullin neddylation.
- Acetylation directs Ubc12-Dcn1 interactions and prevents charge repulsion at the N-terminus.
Conclusions:
- This research establishes a direct link between N-terminal acetylation and ubiquitin-like protein conjugation.
- A novel mechanism for N-terminal acetylation-dependent protein recognition is defined, highlighting its importance in regulating protein interactions and cellular processes.
Related Concept Videos
Phase II Reactions: Acetylation Reactions
Acetylation, a phase II biotransformation reaction, introduces an acetyl group to drugs or their metabolites. Acetyltransferase enzymes facilitate this reaction, which resembles α-amino acid conjugation due to the addition of a functional group to the drug molecule.
The substrates for acetylation are typically drugs or their metabolites with an amino, sulfonamide, or hydrazine functional group. Acetylation can occur at several points in the drug molecule, including primary, secondary, and...
The substrates for acetylation are typically drugs or their metabolites with an amino, sulfonamide, or hydrazine functional group. Acetylation can occur at several points in the drug molecule, including primary, secondary, and...
Covalently Linked Protein Regulators
Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
These groups modify specific amino acids in a protein.
Cholinergic Neurons: Neurotransmission
Cholinergic neurotransmission involves the synthesis and the release of acetylcholine (ACh) in order to transmit nerve impulses across the synapse. The process begins with the synthesis of acetyl CoA, a precursor for ACh, from ATP, acetate, and coenzyme A in the mitochondria. Choline, another vital precursor, is transported inside the neuron through choline transporters, including high-affinity choline transporter CHT1, low-affinity choline transporter CTL1, and lower-affinity choline...
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Catenins
Catenins are characterized by multiple binding domains and dynamic structures that allow them to function as linker proteins in cell junction complexes. All catenins, except α-catenin, contain a characteristic protein sequence called the armadillo repeat and are therefore also called armadillo proteins.
Catenins in Cell Junctions
Catenins bind to cell adhesion molecules such as cadherins and link them to different cytoskeletal proteins depending on the type of cell junction. At the adherens...
Catenins in Cell Junctions
Catenins bind to cell adhesion molecules such as cadherins and link them to different cytoskeletal proteins depending on the type of cell junction. At the adherens...
Tail-anchoring of Proteins in the ER Membrane
Tail-anchored, or TA, proteins are estimated to make up to 3-5% of membrane proteins found in the eukaryotic cell. Such proteins have a single transmembrane domain located approximately 30 amino acid residues upstream from the C-terminal end. As a result, the signal recognition particle (SRP) cannot guide a TA protein to the ER membrane for cotranslational insertion. Hence, they are integrated into the ER membrane post-translationally using their C-terminal end as the anchor. TA proteins...

