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Deconvolution of pulse trains with the L0 penalty
1Department of Bioinformatics, Erasmus Medical Center, Rotterdam, The Netherlands. j.derooi@erasmusmc.nl
Abstract:
The output of many instruments can be modeled as a convolution of an impulse response and a series of sharp spikes. Deconvolution considers the inverse problem: estimate the input spike train from an observed (noisy) output signal. We approach this task as a linear inverse problem, solved using penalized regression. We propose the use of an L(0) penalty and compare it with the more common L(2) and L(1) penalties. In all cases a simple and iterative weighted regression procedure can be used. The model is extended with a smooth component to handle drifting baselines. Application to three different data sets shows excellent results.
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