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Motional effects on NMR structural data. Comparison of spinach and Escherichia coli acyl carrier proteins
Y Kim1, J B Ohlrogge, J H Prestegard
1Chemistry Department, Yale University, New Haven, CT 06511.
Abstract:
Proteins in solution need not exist in a single rigid structure but can exist in a dynamic equilibrium among structural forms. The problems that this poses for structure determination using nuclear Overhauser effect data from two-dimensional NMR experiments are discussed and illustrated with data on functionally equivalent proteins from two different species. One of these proteins, acyl carrier protein from Escherichia coli, shows a single set of resonances, easily interpreted on the basis of a single rigid structure. However, the related protein, acyl carrier protein from spinach, shows two sets of resonances, suggesting that two conformers in dynamic equilibrium would be a better structural model.