Related Experiment Video
Updated: May 28, 2026

qKAT: Quantitative Semi-automated Typing of Killer-cell Immunoglobulin-like Receptor Genes
Published on: March 6, 2019
Natural killer inhibitory receptor expression associated with treatment failure and interleukin-28B genotype in
Lucy Golden-Mason1, Kiran M Bambha, Linling Cheng
1Division of Gastroenterology & Hepatology, Hepatitis C Center, Department of Medicine, University of Colorado Denver & National Jewish Hospital, Denver, CO, USA.
Unlabelled:
Natural killer (NK) cells constitute a first line of defense against viral infections; their function is governed by the integration of signals from multiple activating and inhibitory surface receptors. We hypothesized that because NKs become rapidly activated by cytokines, response to anti-hepatitis C virus (HCV) therapy would be predicted by the phenotype and function of NKs. We used a cohort of 101 patients (55 African, 46 Caucasian-American) who received pegylated-interferon (IFN) and ribavirin for 48 weeks. Multiparameter FACS analysis was used to examine relative expression of 14 different inhibitory/activating receptors. Interleukin (IL)-28B genotyping (rs12979860) was also performed. Pretreatment levels of inhibitory receptors CD158a, CD158b, and CD158e were higher in patients who demonstrated poor viral decline within the first 28 days of therapy. Higher expression levels of inhibitory receptors NKG2A, CD158b, and CD158e were demonstrable in patients who failed to achieve sustained virologic response (SVR). Patients carrying the IL-28B T allele had higher NKG2A expression on effector NKs. We created a mathematical regression model incorporating race, viral level, and two inhibitory receptors. The area-under-the curve was 0.88, which is highly predictive of SVR. Moreover, the model performed complementarily with IL-28B across the CC, CT, and TT genotypes. Purified NKG2A(neg) NKs treated with pegylated-IFN-α for 4 hours demonstrated higher levels of IFN-γ-inducible protein-10 (IP-10) and tumor necrosis factor-related apoptosis-inducing ligand (TRAIL) compared with their NKG2A(pos) counterparts.
Conclusions:
These results provide novel insights into the associations of NK phenotype with IL-28B genotype and gene expression patterns, as well as the role of NKs in mediating IFN-induced viral clearance of chronic HCV infection.
Insights
Natural killer (NK) cell inhibitory receptor levels predict hepatitis C virus (HCV) treatment response. NK cell phenotype combined with IL-28B genotype offers a powerful predictive model for sustained virologic response.
Area of Science:
- Immunology
- Virology
- Genetics
Background:
- Natural killer (NK) cells are crucial for innate immunity against viral infections.
- NK cell function is regulated by a balance of activating and inhibitory surface receptors.
- Hepatitis C virus (HCV) infection is a significant global health concern.
Purpose of the Study:
- To investigate the predictive value of NK cell phenotype and function for treatment response in chronic HCV patients.
- To explore the association between NK cell receptor expression, IL-28B genotype, and treatment outcomes.
- To develop a predictive model for sustained virologic response (SVR) to pegylated-interferon and ribavirin therapy.
Main Methods:
- Multiparameter flow cytometry (FACS) was used to analyze 14 inhibitory/activating receptors on NK cells from 101 HCV patients.
- Interleukin (IL)-28B genotyping (rs12979860) was performed.
- A mathematical regression model was developed incorporating race, viral load, and NK receptor expression.
Main Results:
- Higher pretreatment levels of CD158a, CD158b, and CD158e were associated with poor early viral decline.
- Elevated NKG2A, CD158b, and CD158e expression predicted failure to achieve SVR.
- A predictive model combining race, viral load, and two inhibitory receptors achieved an area under the curve of 0.88 for SVR prediction.
- NKG2A-negative NK cells showed enhanced IFN-γ-inducible protein-10 (IP-10) and tumor necrosis factor-related apoptosis-inducing ligand (TRAIL) production upon stimulation.
Conclusions:
- NK cell phenotype, particularly inhibitory receptor expression, is strongly associated with treatment response in chronic HCV.
- The combination of NK cell phenotype and IL-28B genotype provides a robust predictor of SVR.
- These findings highlight the role of NK cells in mediating interferon-based viral clearance and offer insights for personalized therapy.
Related Concept Videos
Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu
Pharmacogenetics of Drug Targets: β₂-Adrenergic Receptors, Apo E, Thymidylate Synthase
Inhibitors of Viral Protein Synthesis
Drugs for Treatment of Crohn's Disease in IBD Using Biologic Agents: Anti-TNF
Inflammatory Bowel Disease III: Crohn's Disease
