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Updated: May 28, 2026

Realistic Membrane Modeling Using Complex Lipid Mixtures in Simulation Studies
Published on: September 1, 2023
Communication: consistent picture of lateral subdiffusion in lipid bilayers: molecular dynamics simulation and exact
Gerald R Kneller1, Krzysztof Baczynski, Marta Pasenkiewicz-Gierula
1Centre de Biophysique Moléculaire, CNRS, Rue Charles Sadron, 45071 Orléans, France. gerald.kneller@cnrs-orleans.fr
Abstract:
This communication presents a molecular dynamics simulation study of a bilayer consisting of 128 dioleoyl-sn-glycero-3-phosphocholine molecules, which focusses on the center-of-mass diffusion of the lipid molecules parallel to the membrane plane. The analysis of the simulation results is performed within the framework of the generalized Langevin equation and leads to a consistent picture of subdiffusion. The mean square displacement of the lipid molecules evolves as ∝ t(α), with α between 0.5 and 0.6, and the fractional diffusion coefficient is close to the experimental value for a similar system obtained by fluorescence correlation spectroscopy. We show that the long-time tails of the lateral velocity autocorrelation function and the associated memory function agree well with exact results which have been recently derived by asymptotic analysis [G. Kneller, J. Chem. Phys. 134, 224106 (2011)]. In this context, we define characteristic time scales for these two quantities.
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