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Updated: May 28, 2026

Implementation of In Vitro Drug Resistance Assays: Maximizing the Potential for Uncovering Clinically Relevant Resistance Mechanisms
Published on: December 9, 2015
Molecular network pathways and functional analysis of tumor signatures associated with development of resistance to
T-J Song1, D Haddad, P Adusumilli
1Department of Surgery, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.
Abstract:
Replication-competent attenuated herpes simplex viruses have proven effective in killing many cancer cell lines. However, determinants of resistance to oncolytic therapy are mostly unknown. We developed viral therapy-resistant cells and examined changes in gene-expression pattern compared with therapy-sensitive parental cells. Colon cancer cell line HT29 and hepatoma cell line PLC5 were exposed to increasing concentrations of virus G207. Therapy-resistant cells were isolated and grown in vitro. Tumorigenicity was confirmed by ability of cell lines to form tumors in mice. Human Genome U133A complementary DNA microarray chips were used to determine gene-expression patterns, which were analyzed in the context of molecular network interactions, pathways and gene ontology. In parental cell lines, 90-100% of cells were killed by day 7 at 1.0 multiplicity of infection. In resistant cell lines, cytotoxicity assay confirmed 200- to 400-fold resistance. Microarray analysis confirmed changes in gene expressions associated with resistance: cell surface proteins affecting viral attachment and entry, cellular proteins affecting nucleotide pools and proteins altering apoptotic pathways. These changes would decrease viral infection and replication. Our study identifies gene-expression signatures associated with resistance to oncolytic viral therapy. These data provide potential targets to overcome resistance, and suggest that molecular assays may be useful in selecting patients for trial with this novel treatment.
Insights
Researchers identified gene expression changes in cancer cells resistant to oncolytic virus therapy. These findings reveal mechanisms of resistance and potential targets to improve viral cancer treatments.
Area of Science:
- Oncology
- Virology
- Molecular Biology
Background:
- Replication-competent attenuated herpes simplex viruses show promise in cancer therapy.
- Mechanisms of resistance to oncolytic viral therapy are largely unknown.
Purpose of the Study:
- To investigate gene expression changes in cancer cells that confer resistance to oncolytic viral therapy.
- To identify molecular targets for overcoming resistance to oncolytic viruses.
Main Methods:
- Developed therapy-resistant colon (HT29) and hepatoma (PLC5) cancer cell lines using oncolytic virus G207.
- Analyzed gene expression patterns using complementary DNA microarray chips.
- Examined gene expression in the context of molecular networks, pathways, and gene ontology.
Main Results:
- Resistant cell lines exhibited 200- to 400-fold resistance to viral cytotoxicity compared to parental lines.
- Microarray analysis revealed significant alterations in gene expression related to viral attachment, entry, nucleotide pools, and apoptotic pathways.
- Identified specific gene expression signatures associated with resistance to oncolytic viral therapy.
Conclusions:
- Gene expression changes in cell surface proteins, nucleotide metabolism, and apoptosis pathways contribute to resistance against oncolytic viruses.
- The identified gene expression signatures offer potential targets to enhance the efficacy of oncolytic viral therapy.
- Molecular assays may aid in patient selection for oncolytic virus treatment trials.
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