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Merging Absolute and Relative Quantitative PCR Data to Quantify STAT3 Splice Variant Transcripts
Published on: October 9, 2016
QUICK identification and SPR validation of signal transducers and activators of transcription 3 (Stat3) interacting
Peng Zheng1, Qiu Zhong, Qian Xiong
1Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China.
Abstract:
Signal transducers and activators of transcription 3 (Stat3) has been reported to be involved in the pathogenesis of various human diseases and is constitutively active in human multiple myeloma (MM) U266 cells. The Stat3-regulated mechanisms involved in these processes, however, are not fully defined. To further understand the regulation of Stat3 activity, we performed a systematic proteomic analysis of Stat3 interacting proteins in U266 cells. This analysis, termed quantitative immunoprecipitation combined with knockdown (QUICK), combines RNAi, stable isotope labeling with amino acids in cell culture (SILAC), immunoprecipitation, and quantitative MS. As a result, quantitative mass spectrometry analysis allowed us to distinguish specific Stat3 interacting proteins from background proteins and led to the identification of a total of 38 proteins. Three Stat3 interacting proteins - 14-3-3ζ, PRKCB and Hsp90 - were further confirmed by reciprocal co-immunoprecipitations and surface plasmon resonance (SPR) analysis. Our results therefore not only uncover a number of Stat3 interacting proteins that possess a variety of cellular functions, but also provide new insight into the mechanisms that regulate Stat3 activity and function in MM cells.
Insights
Researchers identified 38 proteins interacting with Signal transducer and activator of transcription 3 (Stat3) in multiple myeloma cells. This study provides new insights into Stat3 regulation and function in human diseases.
Area of Science:
- Molecular Biology
- Proteomics
- Cancer Biology
Background:
- Signal transducer and activator of transcription 3 (Stat3) plays a role in human disease pathogenesis.
- Constitutive Stat3 activity is observed in human multiple myeloma (MM) U266 cells.
- Stat3-regulated mechanisms in MM are not fully understood.
Purpose of the Study:
- To systematically identify Stat3 interacting proteins in U266 MM cells.
- To elucidate the regulatory mechanisms of Stat3 activity and function in MM.
Main Methods:
- Quantitative immunoprecipitation combined with knockdown (QUICK) was employed.
- QUICK integrates RNAi, stable isotope labeling with amino acids in cell culture (SILAC), immunoprecipitation, and quantitative mass spectrometry (MS).
- Reciprocal co-immunoprecipitations and surface plasmon resonance (SPR) were used for validation.
Main Results:
- A total of 38 Stat3 interacting proteins were identified.
- Proteomic analysis distinguished specific Stat3 interactors from background proteins.
- 14-3-3ζ, PRKCB, and Hsp90 were confirmed as Stat3 interacting proteins.
Conclusions:
- The study identified novel Stat3 interacting proteins involved in various cellular functions.
- New insights into the regulation of Stat3 activity and function in multiple myeloma cells were provided.
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