Related Experiment Video
Updated: May 27, 2026

Monitoring Cell-autonomous Circadian Clock Rhythms of Gene Expression Using Luciferase Bioluminescence Reporters
Published on: September 27, 2012
The CLOCK gene and mood disorders: a case-control study and meta-analysis
Taro Kishi1, Reiji Yoshimura, Yasuhisa Fukuo
1Department of Psychiatry Research, The Zucker Hillside Hospital, Glen Oaks, New York, USA. tarok@fujita-hu.ac.jp
Abstract:
The clock gene (CLOCK) is considered to be a good candidate gene for the pathophysiology of mood disorders, including bipolar disorder (BP) and major depressive disorder (MDD). rs1801260 (T3111C) has been detected at position 3111 in the CLOCK mRNA 3' untranslated region, and was reported to be associated with a substantial delay in preferred timing for activity and sleep in a human study. As for function, rs1801260 has been speculated to affect mRNA. Therefore, the authors investigated the association between the three tagging single-nucleotide polymorphisms (SNPs) (rs3736544, rs1801260, and rs3749474) in CLOCK and risk of BP (n=867) and MDD (n=139) compared to controls (n=889) in the Japanese population. In addition, we also performed an updated meta-analysis of nine published, genetic association studies investigating the relationship between rs1801260 and mood disorder risk, comprising 3321 mood disorders cases and 3574 controls. We did not detect any associations between tagging SNPs in CLOCK and BP or MDD in the allele, genotype, or haplotype analysis (global p(BP)=.605 and global p(MDD)=.211). Moreover, rs1801260 was also not associated with BP, MDD, or any mood disorders in the meta-analysis. In conclusion, these data suggest that CLOCK does not play a major role in the pathophysiology of mood disorders.
Insights
The CLOCK gene is not significantly associated with bipolar disorder or major depressive disorder risk in the Japanese population. A meta-analysis also found no link between the rs1801260 variant and mood disorders, suggesting CLOCK is not a major factor.
Area of Science:
- Genetics
- Psychiatry
- Molecular Biology
Background:
- The CLOCK gene is a candidate for mood disorder pathophysiology.
- The CLOCK rs1801260 polymorphism may affect circadian rhythms.
- Previous studies suggest a potential link between CLOCK and mood disorders.
Purpose of the Study:
- To investigate the association between CLOCK single-nucleotide polymorphisms (SNPs) and the risk of bipolar disorder (BP) and major depressive disorder (MDD) in a Japanese population.
- To conduct an updated meta-analysis on the association between the CLOCK rs1801260 polymorphism and mood disorder risk.
Main Methods:
- Case-control study of three CLOCK tagging SNPs (rs3736544, rs1801260, rs3749474) in 867 BP, 139 MDD patients, and 889 controls.
- Allele, genotype, and haplotype analyses were performed.
- Updated meta-analysis of nine genetic association studies involving 3321 mood disorder cases and 3574 controls.
Main Results:
- No significant associations were found between the studied CLOCK tagging SNPs and the risk of BP or MDD in the Japanese population.
- The rs1801260 polymorphism was not associated with BP, MDD, or any mood disorders in the meta-analysis.
- Global p-values for BP and MDD were .605 and .211, respectively, indicating no statistical significance.
Conclusions:
- The CLOCK gene does not appear to play a major role in the pathophysiology of bipolar disorder or major depressive disorder.
- The findings do not support the hypothesis linking CLOCK gene variations to increased risk of these mood disorders.
- Further research may be needed to explore other genetic factors contributing to mood disorder development.
Related Concept Videos
Circadian Rhythms and Gene Regulation
Circadian Rhythms and Gene Regulation
Human Genetics
The complex relationship between genetics and psychology is observable through common biological components such...
Depressive Disorders: Etiology
Biological Factors in Depression
Biological predispositions significantly influence the risk of developing depressive disorders. Genetic studies highlight the role of variations in the serotonin transporter...
Biological Clocks and Seasonal Responses
Bipolar Disorder

