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Molecular diagnosis of diarrhea: current status and future potential
James A Platts-Mills1, Darwin J Operario, Eric R Houpt
1Department of Medicine, University of California San Francisco, 505 Parnassus Avenue, Room 987, San Francisco, CA, 94143-0119, USA, james.platts-mills@ucsf.edu.
Abstract:
Determining the microbiologic etiology of enteric infection remains an elusive goal. Conventional approaches, including culture, microscopy, and antigen-based tests have significant limitations such as limit of detection and the need for multiple procedures. Molecular diagnostics, especially PCR based tests, are rapidly changing research and practice in infectious diseases. Diarrheal disease, with its broad range of potential infectious etiologies, is well suited for multiplex molecular testing. This review highlights examples of currently employed molecular tests, as well as ways in which these tests can be applied in the future. The absence of a gold standard for the microbiologic cause of diarrhea means that the clinical significance of detected organisms may not always be clear. Conventional wisdom is that there should be one main pathogen causing diarrhea, however our thinking is challenged by increased detection of mixed infections. Thus, the successful incorporation of molecular diagnostics for diarrheal disease into practice will require both a careful understanding of the technical aspects and research to define their clinical utility.
Insights
Molecular diagnostics, like PCR tests, offer advanced methods for identifying causes of diarrheal disease. Further research is needed to clarify the clinical significance of detected pathogens, especially in mixed infections.
Area of Science:
- Microbiology
- Infectious Diseases
- Molecular Diagnostics
Background:
- Conventional methods for diagnosing enteric infections have limitations in sensitivity and require multiple steps.
- Molecular diagnostics, particularly PCR (polymerase chain reaction), are transforming infectious disease diagnostics.
- Diarrheal disease presents a complex challenge due to its diverse potential etiologies.
Purpose of the Study:
- To review current molecular diagnostic tests for diarrheal disease.
- To explore future applications of these molecular tests.
- To address the challenges in interpreting results, including mixed infections.
Main Methods:
- Review of existing literature on molecular diagnostic techniques for enteric pathogens.
- Discussion of the advantages and limitations of PCR-based assays.
- Analysis of the implications of detecting multiple organisms in diarrheal samples.
Main Results:
- Molecular tests provide a more comprehensive approach compared to conventional methods.
- Increased detection of mixed infections challenges traditional diagnostic paradigms.
- The clinical utility of molecular diagnostics requires further investigation.
Conclusions:
- Molecular diagnostics represent a significant advancement in identifying the causes of diarrheal disease.
- Defining the clinical significance of detected pathogens, especially in polymicrobial infections, is crucial for effective implementation.
- Future research should focus on establishing the utility and interpretation guidelines for molecular tests in clinical practice.
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