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Fluorescence-based Monitoring of PAD4 Activity via a Pro-fluorescence Substrate Analog
Published on: November 5, 2014
Activity of the mycobacterial proteasomal ATPase Mpa is reversibly regulated by pupylation
Cyrille L Delley1, Frank Striebel, Franziska M Heydenreich
1Institute of Molecular Biology and Biophysics, ETH Zurich, 8093 Zurich, Switzerland.
Abstract:
Pupylation is a bacterial post-translational modification of target proteins on lysine residues with prokaryotic ubiquitin-like protein Pup. Pup-tagged substrates are recognized by a proteasome-interacting ATPase termed Mpa in Mycobacterium tuberculosis. Mpa unfolds pupylated substrates and threads them into the proteasome core particle for degradation. Interestingly, Mpa itself is also a pupylation target. Here, we show that the Pup ligase PafA predominantly produces monopupylated Mpa modified homogeneously on a single lysine residue within its C-terminal region. We demonstrate that this modification renders Mpa functionally inactive. Pupylated Mpa can no longer support Pup-mediated proteasomal degradation due to its inability to associate with the proteasome core. Mpa is further inactivated by rapid Pup- and ATPase-driven deoligomerization of the hexameric Mpa ring. We show that pupylation of Mpa is chemically and functionally reversible. Mpa regains its enzymatic activity upon depupylation by the depupylase Dop, affording a rapid and reversible activity control over Mpa function.
Insights
Pupylation, a bacterial protein modification, inactivates the Mpa enzyme in Mycobacterium tuberculosis. This reversible process allows controlled protein degradation via the proteasome.
Area of Science:
- Microbiology
- Biochemistry
- Molecular Biology
Background:
- Pupylation is a bacterial post-translational modification involving prokaryotic ubiquitin-like protein (Pup).
- In Mycobacterium tuberculosis, the proteasome-interacting ATPase Mpa recognizes and degrades pupylated substrates.
- Mpa itself is a target for pupylation, suggesting a regulatory mechanism.
Purpose of the Study:
- To investigate the effect of Mpa pupylation on its function.
- To elucidate the mechanism of Mpa inactivation and reactivation.
- To understand the role of Pup ligase PafA and depupylase Dop in regulating Mpa activity.
Main Methods:
- Investigating Mpa pupylation by PafA using biochemical assays.
- Assessing the impact of Mpa pupylation on its interaction with the proteasome.
- Analyzing the effect of depupylation by Dop on Mpa activity.
- Studying the oligomeric state of Mpa under different conditions.
Main Results:
- PafA predominantly produces monopupylated Mpa on a C-terminal lysine residue.
- Pupylated Mpa is functionally inactive, unable to associate with the proteasome.
- Mpa inactivation is accelerated by Pup- and ATPase-driven deoligomerization.
- Mpa activity is chemically and functionally reversible upon depupylation by Dop.
Conclusions:
- Mpa pupylation serves as a mechanism for reversible inactivation of the proteasome-interacting ATPase.
- This reversible modification allows for precise control over Pup-mediated proteasomal degradation.
- The interplay between PafA, Pup, and Dop provides a dynamic regulatory system for Mpa function.
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