Oligothiophenes as fluorescent markers for biological applications
Massimo L Capobianco1, Giovanna Barbarella, Antonio Manetto
1Istituto per Sintesi Organica e Fotoreattività, Consiglio Nazionale delle Ricerche, Via Gobetti 101, Bologna 40129, Italy. capobianco@isof.cnr.it
Molecules (Basel, Switzerland)
|January 20, 2012
Summary
Oligothiophenes are versatile fluorescent markers for biological studies. These stable, bright compounds can be chemically modified to label biomolecules for applications like cell imaging and hybridization assays.
Area of Science:
- Organic Chemistry
- Biotechnology
- Materials Science
Background:
- Oligothiophenes possess semiconductor properties and fluorescence.
- They exhibit excellent chemical and optical stability, high absorbance, and quantum yield.
- Fluorescent emission is tunable via organic synthesis by altering ring number and side chains.
Purpose of the Study:
- To review the application of oligothiophenes as fluorescent markers in biological studies.
- To highlight the derivatization of oligothiophenes for biomolecule conjugation.
- To showcase their utility in various biological experiments.
Main Methods:
- Derivatization of oligothiophenes with active functional groups (e.g., phosphoramidite, azide).
- Covalent conjugation of derivatized oligothiophenes to biomolecules (oligonucleotides, proteins, nanoparticles).
- Application of tagged molecules in biological assays and cell imaging.
Main Results:
- Oligothiophenes can be successfully functionalized for covalent attachment to biomolecules.
- Tagged biomolecules demonstrate utility in hybridization studies.
- Oligothiophene-labeled molecules enable imaging of fixed and living cells.
Conclusions:
- Oligothiophenes are effective and adaptable fluorescent probes for diverse biological applications.
- Their tunable optical properties and stability make them valuable tools in bioimaging and molecular studies.
- Multilabeling experiments demonstrate their potential for complex biological investigations.
Related Concept Videos
Photoluminescence: Applications
Photoluminescence offers a wide range of applications due to its inherent sensitivity and selectivity. This technique allows for both direct and indirect analyses of the analyte. Direct quantitative analysis is possible when the analyte exhibits a favorable quantum yield for fluorescence or phosphorescence. However, an indirect analysis may be feasible if the analyte is not fluorescent or phosphorescent, or if the quantum yield is unfavorable. Indirect methods include reacting the analyte with...
Labeling DNA Probes
DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
Reporter Genes
Reporter genes are a type of protein-coding gene that are often tagged to a gene of interest. Once inside a target cell, reporter genes usually produce visually identifiable characteristics like fluorescence and luminescence when expressed along with the gene of interest. Thus, reporter genes “report” the presence or absence of genes of interest in an organism, determine the gene expression pattern, or track the physical location of a DNA segment or protein in the cell.
Commonly used reporter...
Commonly used reporter...


