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The Long Non-Coding RNAs: A New (P)layer in the "Dark Matter"
Thomas Derrien1, Roderic Guigó, Rory Johnson
1Bioinformatics and Genomics, Centre for Genomic Regulation, Universitat Pompeu Fabra Barcelona, Spain.
Frontiers in Genetics
|February 4, 2012
Summary
The biological significance of non-coding RNAs (ncRNAs), especially long non-coding RNAs (lncRNAs), is increasingly recognized. These molecules are key regulators of gene expression and are implicated in human diseases.
Area of Science:
- Molecular Biology
- Genomics
- Epigenetics
Background:
- The cell's transcriptome comprises diverse RNA molecules, including non-coding RNAs (ncRNAs).
- Advances in sequencing reveal the genome's extensive transcription into various ncRNAs, whose significance was underestimated.
- Long non-coding RNAs (lncRNAs) are a numerous and functionally diverse class of ncRNAs.
Purpose of the Study:
- To review current catalogs of annotated long non-coding RNAs (lncRNAs).
- To summarize recent advancements in understanding the function and regulation by lncRNAs.
- To highlight the role of lncRNAs in epigenetic gene regulation and human diseases.
Main Methods:
- Review of existing literature and databases on annotated long non-coding RNAs (lncRNAs).
- Analysis of recent experimental studies investigating lncRNA functions.
- Synthesis of findings related to lncRNA involvement in epigenetic mechanisms.
Main Results:
- The vast majority of the genome is transcribed, producing a complex population of ncRNAs.
- A growing number of experimentally studied lncRNAs are identified as key regulators of epigenetic gene expression.
- lncRNAs are implicated in significant human diseases, including cancer and neurodegeneration.
Conclusions:
- Long non-coding RNAs (lncRNAs) represent a critical and functionally diverse class of regulatory molecules.
- Emerging evidence establishes lncRNAs as crucial players in epigenetic gene regulation in mammalian cells.
- The study of lncRNAs is vital for understanding and potentially treating human diseases.
Related Concept Videos
lncRNA - Long Non-coding RNAs
In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA (lncRNA)...
lncRNA - Long Non-coding RNAs
In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA (lncRNA)...
Types of RNA
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in regulating gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA Performs Diverse...
RNA Performs Diverse...
Types of RNA
Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
Ribosomal RNA Synthesis
Ribosome synthesis is a highly complex and coordinated process involving more than 200 assembly factors. The synthesis and processing of ribosomal components occurs not only in the nucleolus but also in the nucleoplasm and the cytoplasm of eukaryotic cells.
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
MicroRNAs
MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
