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Updated: May 24, 2026

Affinity Purification of Influenza Virus Ribonucleoprotein Complexes from the Chromatin of Infected Cells
Published on: June 3, 2012
A nuclear export signal in the matrix protein of Influenza A virus is required for efficient virus replication
Shuai Cao1, Xiaoling Liu, Maorong Yu
1Center for Molecular Virology, CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Abstract:
The influenza A virus matrix 1 protein (M1) shuttles between the cytoplasm and the nucleus during the viral life cycle and plays an important role in the replication, assembly, and budding of viruses. Here, a leucine-rich nuclear export signal (NES) was identified specifically for the nuclear export of the M1 protein. The predicted NES, designated the Flu-A-M1 NES, is highly conserved among all sequences from the influenza A virus subtype, but no similar NES motifs are found in the M1 sequences of influenza B or C viruses. The biological function of the Flu-A-M1 NES was demonstrated by its ability to translocate an enhanced green fluorescent protein (EGFP)-NES fusion protein from the nucleus to the cytoplasm in transfected cells, compared to the even nuclear and cytoplasmic distribution of EGFP. The translocation of EGFP-NES from the nucleus to the cytoplasm was not inhibited by leptomycin B. NES mutations in M1 caused a nuclear retention of the protein and an increased nuclear accumulation of NEP during transfection. Indeed, as shown by rescued recombinant viruses, the mutation of the NES impaired the nuclear export of M1 and significantly reduced the virus titer compared to titers of wild-type viruses. The NES-defective M1 protein was retained in the nucleus during infection, accompanied by a lowered efficiency of the nuclear export of viral RNPs (vRNPs). In conclusion, M1 nuclear export was specifically dependent on the Flu-A-M1 NES and critical for influenza A virus replication.
Insights
A newly identified nuclear export signal (NES) in influenza A virus matrix protein 1 (M1) is crucial for viral replication. This Flu-A-M1 NES facilitates M1 protein export, essential for efficient virus production.
Area of Science:
- Virology
- Molecular Biology
- Cell Biology
Background:
- The influenza A virus matrix protein 1 (M1) is vital for viral replication, assembly, and budding.
- M1 protein shuttles between the cytoplasm and nucleus during the viral life cycle.
Purpose of the Study:
- To identify and characterize a specific nuclear export signal (NES) for the influenza A virus M1 protein.
- To elucidate the role of this NES in viral replication and M1 protein localization.
Main Methods:
- Identification of a leucine-rich NES (Flu-A-M1 NES) conserved in influenza A virus subtypes.
- Functional analysis using enhanced green fluorescent protein (EGFP)-NES fusion proteins in transfected cells.
- Assessment of NES mutations in M1 protein localization and viral replication using rescued recombinant viruses.
Main Results:
- The identified Flu-A-M1 NES specifically mediates nuclear export of M1 protein, demonstrated by EGFP-NES translocation.
- Mutations in the Flu-A-M1 NES resulted in M1 nuclear retention and impaired viral replication, significantly reducing virus titers.
- NES-defective M1 protein hindered nuclear export of viral RNPs (vRNPs) during infection.
Conclusions:
- Nuclear export of influenza A virus M1 protein is specifically dependent on the Flu-A-M1 NES.
- The Flu-A-M1 NES is critical for efficient influenza A virus replication and M1 protein function.
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