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Updated: May 24, 2026

Measuring Phagosome pH by Ratiometric Fluorescence Microscopy
Published on: December 7, 2015
Determination of intracellular pH using sensitive, clickable fluorescent probes
Nazmiye B Yapici1, Srinivas Rao Mandalapu, Teng-Leong Chew
1Department of Chemistry, Michigan Technological University, Houghton, MI 49931, USA.
Researchers developed new fluorescent pH probes for accurately measuring acidity within cells. Probe 3 shows an 800-fold fluorescence increase, ideal for tracking intracellular hydrogen ion [H+] levels in acidic organelles.
Area of Science:
- Chemical Biology
- Molecular Imaging
- Biochemistry
Background:
- Accurate measurement of intracellular pH is crucial for understanding cellular processes.
- Existing fluorescent pH probes often lack sensitivity, photostability, or optimal pKa for specific organelles.
Purpose of the Study:
- To synthesize and evaluate novel acidic fluorescent pH probes.
- To assess probe performance for intracellular pH monitoring, particularly in acidic organelles.
Main Methods:
- Synthesis of a series of acidic fluorescent pH probes.
- Titration analyses to determine pH dependence and fluorescence changes.
- Fluorescent imaging of HepG2 and Hela cells to evaluate intracellular pH sensing capabilities.
Main Results:
- Developed probes with high pH dependence, sensitivity, photostability, and cell permeability.
- Probe 3 exhibited an 800-fold fluorescence intensity increase between pH 8.0 and 4.1.
- Probe 3 demonstrated effective monitoring of intracellular hydrogen ion [H+] levels in cellular imaging.
Conclusions:
- The synthesized probes, particularly probe 3, are highly effective for intracellular pH sensing.
- The probes' optimal pKa facilitates the study of acidic organelles.
- Terminal alkyne/azido groups enable library expansion via click chemistry for diverse sensor development.
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