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Updated: May 23, 2026

Genetic Mapping of Thermotolerance Differences Between Species of Saccharomyces Yeast via Genome-Wide Reciprocal Hemizygosity Analysis
Published on: August 12, 2019
Cryptic distant relatives are common in both isolated and cosmopolitan genetic samples.
Brenna M Henn1, Lawrence Hon, J Michael Macpherson
123andMe, Inc., Mountain View, California, United States of America. bmhenn@stanford.edu
High-density genome data reveal distant relatives by analyzing DNA identical by descent (IBD). This genetic similarity analysis identifies thousands of 2nd to 9th cousin pairs, impacting genetic genealogy and forensics.
Area of Science:
- Genetics
- Population Genetics
- Bioinformatics
Background:
- Close familial relationships can be inferred using a few hundred single nucleotide polymorphisms (SNPs).
- High-density genome-wide SNP data enable the inference of more distant relationships, such as 2nd to 9th cousinships.
- Understanding genetic similarity and kinship over 100-300 years is crucial for various genetic studies.
Purpose of the Study:
- To characterize the relationship between genetic similarity and the degree of kinship within a 100-300 year timeframe.
- To analyze the sharing of DNA inferred to be identical by descent (IBD) across diverse populations.
- To determine the implications of detecting distant relatives for genetic genealogy, forensics, and genotype/phenotype mapping.
Main Methods:
- Analysis of DNA inferred to be identical by descent (IBD) in large datasets (23andMe and HGDP-CEPH).
- Comparison of IBD sharing across 121 ethnolinguistically and continentally defined populations.
- Extensive pedigree-based simulations to establish bounds for predicted relationship degrees based on genomic IBD sharing.
Main Results:
- Average IBD sharing differs significantly between ethnolinguistic groups (e.g., Native Americans, Finns, Ashkenazi Jews) and continental populations.
- Pedigree simulations provided bounds for predicting relationship degrees from genomic IBD sharing in various population types.
- Tens of thousands of 2nd to 9th degree cousin pairs were identified within a sample of 5,000 Europeans.
Conclusions:
- Distant relatives are ubiquitously detectable via IBD segments in both ethnolinguistic and large 'unrelated' population samples.
- The findings have significant implications for the fields of genetic genealogy, forensics, and genotype/phenotype mapping studies.
- High-density SNP data provide a powerful tool for uncovering complex familial structures and population genetic patterns.
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