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Updated: May 22, 2026

Biosensor-based High Throughput Biopanning and Bioinformatics Analysis Strategy for the Global Validation of Drug-protein Interactions
Published on: December 1, 2020
Using ODIN for a PharmGKB revalidation experiment
Fabio Rinaldi1, Simon Clematide, Yael Garten
1Institute of Computational Linguistics, Binzmuhlestrasse 171, 8050 Zurich, Switzerland. fabio.rinaldi@uzh.ch
Abstract:
The need for efficient text-mining tools that support curation of the biomedical literature is ever increasing. In this article, we describe an experiment aimed at verifying whether a text-mining tool capable of extracting meaningful relationships among domain entities can be successfully integrated into the curation workflow of a major biological database. We evaluate in particular (i) the usability of the system's interface, as perceived by users, and (ii) the correlation of the ranking of interactions, as provided by the text-mining system, with the choices of the curators.
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