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Related Experiment Video

Updated: May 22, 2026

Multiscale Sampling of a Heterogeneous Water/Metal Catalyst Interface using Density Functional Theory and Force-Field Molecular Dynamics
10:52

Multiscale Sampling of a Heterogeneous Water/Metal Catalyst Interface using Density Functional Theory and Force-Field Molecular Dynamics

Published on: April 12, 2019

Time-dependent density-functional theory in massively parallel computer architectures: the OCTOPUS project.

Xavier Andrade1, Joseba Alberdi-Rodriguez, David A Strubbe

  • 1Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138, USA. xavier@tddft.org

Journal of Physics. Condensed Matter : an Institute of Physics Journal
|May 8, 2012
PubMed
Summary
This summary is machine-generated.

We optimized the Octopus code for parallel computing, enhancing its real-time time-dependent density-functional theory (TDDFT) capabilities. This allows efficient study of large molecular systems on supercomputers and GPUs.

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Last Updated: May 22, 2026

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Establishing an Octopus Ecosystem for Biomedical and Bioengineering Research
09:10

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Published on: September 22, 2021

Area of Science:

  • Computational Physics
  • Quantum Chemistry
  • Materials Science

Background:

  • Density-Functional Theory (DFT) is a powerful quantum mechanical modeling method.
  • Time-Dependent DFT (TDDFT) extends DFT to study excited states and dynamic properties.
  • Efficient computation for large systems is crucial for advancing scientific discovery.

Purpose of the Study:

  • To present parallelization efforts for the Octopus code.
  • To enhance the performance of real-time TDDFT calculations.
  • To enable the study of large molecular systems on modern parallel architectures.

Main Methods:

  • Focus on real-time TDDFT, directly propagating time-dependent Kohn-Sham equations.
  • Implement a multi-level parallelization scheme combining real-time TDDFT scalability with real-space domain partitioning.
  • Develop a scalable Poisson solver for efficiency.
  • Utilize blocks of Kohn-Sham states for data parallelism on GPUs and standard processors.

Main Results:

  • Demonstrated the scalability of real-time TDDFT in Octopus on massively parallel systems.
  • Achieved efficient execution on supercomputers with thousands of processors and GPUs.
  • Showed applicability of the GPU strategy for standard processor optimization.

Conclusions:

  • Real-time TDDFT in Octopus is a viable method for excited-state calculations of large systems.
  • The parallelization strategy effectively leverages modern supercomputing architectures.
  • This work paves the way for more complex and larger-scale simulations in computational chemistry and physics.