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Sigpep: calculating unique peptide signature transition sets in a complete proteome background
Kenny Helsens1, Michael Mueller, Niels Hulstaert
1Department of Medical Protein Research, VIB, Ghent, Belgium.
Proteomics
|May 12, 2012
Abstract:
We have created a new software platform called sigpep that analyzes transition redundancy in selected reaction monitoring assays. Building on this platform, we also created a web application to generate transition sets with unique signatures for targeted peptides. The platform has been made available under the permissive Apache 2.0 open-source license, and the web application can be accessed from http://iomics.ugent.be/sigpep.
