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Published on: May 15, 2019
Staphylococcus aureus FabI: inhibition, substrate recognition, and potential implications for in vivo essentiality
Johannes Schiebel1, Andrew Chang, Hao Lu
1Rudolf Virchow Center for Experimental Biomedicine, Institute for Structural Biology, University of Würzburg, D-97080 Würzburg, Germany.
Abstract:
Methicillin-resistant Staphylococcus aureus (MRSA) infections constitute a serious health threat worldwide, and novel antibiotics are therefore urgently needed. The enoyl-ACP reductase (saFabI) is essential for the S. aureus fatty acid biosynthesis and, hence, serves as an attractive drug target. We have obtained a series of snapshots of this enzyme that provide a mechanistic picture of ligand and inhibitor binding, including a dimer-tetramer transition combined with extensive conformational changes. Significantly, our results reveal key differences in ligand binding and recognition compared to orthologous proteins. The remarkable observed protein flexibility rationalizes our finding that saFabI is capable of efficiently reducing branched-chain fatty acid precursors. Importantly, branched-chain fatty acids represent a major fraction of the S. aureus cell membrane and are crucial for its in vivo fitness. Our discovery thus addresses a long-standing controversy regarding the essentiality of the fatty acid biosynthesis pathway in S. aureus rationalizing saFabI as a drug target.
Insights
Novel antibiotics targeting methicillin-resistant Staphylococcus aureus (MRSA) are crucial. Researchers revealed the enoyl-ACP reductase (saFabI) enzyme’s flexibility, explaining its role in fatty acid synthesis and identifying it as a promising drug target.
Area of Science:
- Biochemistry
- Microbiology
- Drug Discovery
Background:
- Methicillin-resistant Staphylococcus aureus (MRSA) poses a global health threat, necessitating new antibiotic strategies.
- The enoyl-ACP reductase (saFabI) enzyme is vital for Staphylococcus aureus fatty acid biosynthesis, making it a key drug target.
- Understanding saFabI's mechanism is critical for developing effective inhibitors.
Purpose of the Study:
- To elucidate the mechanism of ligand and inhibitor binding to saFabI.
- To investigate the structural dynamics and conformational changes of saFabI.
- To explore the role of saFabI in reducing branched-chain fatty acid precursors.
Main Methods:
- Structural biology techniques to capture enzyme snapshots.
- Analysis of enzyme conformational transitions (dimer-tetramer).
- Investigating saFabI's interaction with various ligands and inhibitors.
Main Results:
- Detailed mechanistic insights into saFabI ligand and inhibitor binding were obtained.
- Significant protein flexibility and a dimer-tetramer transition were observed.
- Key differences in ligand recognition compared to homologous enzymes were identified.
- saFabI's capacity to reduce branched-chain fatty acid precursors was confirmed.
- Branched-chain fatty acids were shown to be essential for S. aureus membrane integrity and fitness.
Conclusions:
- The structural flexibility of saFabI rationalizes its role in branched-chain fatty acid metabolism.
- These findings resolve debates on the essentiality of fatty acid biosynthesis in S. aureus.
- saFabI is validated as a promising drug target for combating MRSA infections.
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