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Updated: May 21, 2026

mRNA Interactome Capture from Plant Protoplasts
Published on: July 28, 2017
The NRF2-related interactome and regulome contain multifunctional proteins and fine-tuned autoregulatory loops
Diána Papp1, Katalin Lenti, Dezső Módos
1Department of Genetics, Eötvös Loránd University, Budapest, Hungary.
Abstract:
NRF2 is a well-known, master transcription factor (TF) of oxidative and xenobiotic stress responses. Recent studies uncovered an even wider regulatory role of NRF2 influencing carcinogenesis, inflammation and neurodegeneration. Prompted by these advances here we present a systems-level resource for NRF2 interactome and regulome that includes 289 protein-protein, 7469 TF-DNA and 85 miRNA interactions. As systems-level examples of NRF2-related signaling we identified regulatory loops of NRF2 interacting proteins (e.g., JNK1 and CBP) and a fine-tuned regulatory system, where 35 TFs regulated by NRF2 influence 63 miRNAs that down-regulate NRF2. The presented network and the uncovered regulatory loops may facilitate the development of efficient, NRF2-based therapeutic agents.
Insights
This study presents a comprehensive resource mapping the NRF2 interactome and regulome, revealing complex regulatory networks. These findings may aid in developing novel NRF2-based therapeutics for various diseases.
Area of Science:
- Molecular Biology
- Systems Biology
- Genomics
Background:
- Nuclear factor erythroid 2-related factor 2 (NRF2) is a key regulator of cellular responses to oxidative and xenobiotic stress.
- Emerging evidence highlights NRF2's broader involvement in critical biological processes, including carcinogenesis, inflammation, and neurodegeneration.
Purpose of the Study:
- To establish a systems-level resource detailing the NRF2 interactome and regulome.
- To identify novel regulatory loops and networks involving NRF2 and its associated molecules.
Main Methods:
- Compilation and analysis of protein-protein interactions, transcription factor-DNA interactions, and microRNA interactions related to NRF2.
- Identification of regulatory feedback loops within the NRF2 network.
Main Results:
- A comprehensive resource detailing 289 protein-protein, 7469 TF-DNA, and 85 miRNA interactions associated with NRF2.
- Discovery of intricate regulatory systems, including feedback loops involving NRF2-interacting proteins and a network where NRF2-regulated transcription factors control microRNAs that modulate NRF2 activity.
Conclusions:
- The presented NRF2 network and identified regulatory loops offer valuable insights into its complex biological functions.
- This resource has the potential to accelerate the development of targeted NRF2-based therapeutic strategies for diseases linked to its dysregulation.
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