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An Integrated Approach for Microprotein Identification and Sequence Analysis

An Integrated Approach for Microprotein Identification and Sequence Analysis

Published on: July 12, 2022

ExPASy: SIB bioinformatics resource portal.

Panu Artimo¹, Manohar Jonnalagedda, Konstantin Arnold

¹Vital-IT Group, SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.

Nucleic Acids Research

|June 5, 2012

Summary

ExPASy has evolved into an integrated bioinformatics portal, offering seamless access to diverse life science resources. This enhanced platform serves both expert and novice users across various scientific domains.

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Area of Science:

Bioinformatics
Life Sciences
Proteomics
Genomics

Background:

ExPASy is a renowned bioinformatics resource.
It traditionally focused on proteomics.
The need for an integrated platform across life sciences was identified.

Purpose of the Study:

To describe the evolution of ExPASy into an extensible and integrative portal.
To highlight the expanded access to diverse scientific resources.
To cater to both expert and novice users in life sciences.

Main Methods:

Development of a single web portal as a common entry point.
Integration of decentralized resources (databases, software tools) from SIB Swiss Institute of Bioinformatics and partners.
Implementation of a cross-resource search function.
Monitoring of resource availability and usage.

Main Results:

ExPASy now provides seamless access to a wide range of resources in proteomics, genomics, and other life science domains.
The portal integrates resources hosted by different SIB groups and external institutions.
A search function across selected resources is available.
New visual guidance aids newcomers to the platform.

Conclusions:

The enhanced ExPASy portal offers a unified access point to a broad spectrum of life science tools and data.
It effectively serves a diverse user base, from specialists to beginners.
The platform represents a significant advancement in bioinformatics resource accessibility and integration.