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Updated: May 18, 2026

Replication of the Ordered, Nonredundant Library of Pseudomonas aeruginosa strain PA14 Transposon Insertion Mutants
Published on: May 4, 2018
Pseudomonas aeruginosa exhibits frequent recombination, but only a limited association between genotype and
Timothy J Kidd1, Stephen R Ritchie, Kay A Ramsay
1Queensland Paediatric Infectious Diseases Laboratory, Queensland Children's Medical Research Institute, Royal Children's Hospital, The University of Queensland, Brisbane, Queensland, Australia. Tim_Kidd@health.qld.gov.au
Abstract:
Pseudomonas aeruginosa is an opportunistic pathogen and an important cause of infection, particularly amongst cystic fibrosis (CF) patients. While specific strains capable of patient-to-patient transmission are known, many infections appear to be caused by unique and unrelated strains. There is a need to understand the relationship between strains capable of colonising the CF lung and the broader set of P. aeruginosa isolates found in natural environments. Here we report the results of a multilocus sequence typing (MLST)-based study designed to understand the genetic diversity and population structure of an extensive regional sample of P. aeruginosa isolates from South East Queensland, Australia. The analysis is based on 501 P. aeruginosa isolates obtained from environmental, animal and human (CF and non-CF) sources with particular emphasis on isolates from the Lower Brisbane River and isolates from CF patients obtained from the same geographical region. Overall, MLST identified 274 different sequence types, of which 53 were shared between one or more ecological settings. Our analysis revealed a limited association between genotype and environment and evidence of frequent recombination. We also found that genetic diversity of P. aeruginosa in Queensland, Australia was indistinguishable from that of the global P. aeruginosa population. Several CF strains were encountered frequently in multiple ecological settings; however, the most frequently encountered CF strains were confined to CF patients. Overall, our data confirm a non-clonal epidemic structure and indicate that most CF strains are a random sample of the broader P. aeruginosa population. The increased abundance of some CF strains in different geographical regions is a likely product of chance colonisation events followed by adaptation to the CF lung and horizontal transmission among patients.
Insights
Pseudomonas aeruginosa strains causing cystic fibrosis (CF) infections are often random samples of the general population. Genetic diversity in Queensland mirrors global P. aeruginosa populations, suggesting adaptation and transmission drive CF infections.
Area of Science:
- Microbiology
- Genetics
- Epidemiology
Background:
- Pseudomonas aeruginosa is an opportunistic pathogen causing infections, especially in cystic fibrosis (CF) patients.
- Understanding the link between environmental and CF-associated P. aeruginosa strains is crucial.
Purpose of the Study:
- To investigate the genetic diversity and population structure of P. aeruginosa in South East Queensland, Australia.
- To determine the relationship between environmental and human (CF and non-CF) P. aeruginosa isolates.
Main Methods:
- Multilocus sequence typing (MLST) was used to analyze 501 P. aeruginosa isolates.
- Isolates were sourced from environmental, animal, and human (CF and non-CF) origins, with emphasis on the Lower Brisbane River and local CF patients.
Main Results:
- MLST identified 274 distinct sequence types, with 53 shared across ecological settings.
- Limited association between genotype and environment was observed, alongside evidence of frequent recombination.
- The genetic diversity of P. aeruginosa in Queensland was comparable to global populations.
Conclusions:
- P. aeruginosa exhibits a non-clonal epidemic structure, with most CF strains representing random samples of the broader population.
- Adaptation to the CF lung and horizontal transmission likely explain the prevalence of certain CF strains.
- The study highlights the complex ecological dynamics of P. aeruginosa.
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